Category:Academic Research - Revision history

Christoph at 04:06, 30 June 2016

2016-06-30T04:06:09Z

Christoph at 00:57, 9 August 2006

2006-08-09T00:57:38Z

Christoph: /* Publications */

2006-07-23T03:41:34Z

‎Publications

Christoph: /* Publications */

2006-07-23T03:41:10Z

‎Publications

Christoph: /* Publications */ Added complete reference.

2006-05-21T13:03:43Z

‎Publications: Added complete reference.

Christoph: +"Curriculum Vitae"

2006-05-07T23:24:04Z

+"Curriculum Vitae"

Christoph: format

2006-05-07T23:19:03Z

format

Christoph: /* Publications */ Added "Proteins" paper

2006-03-29T21:34:45Z

‎Publications: Added "Proteins" paper

Christoph: /* Publications */ Added another publication

2006-02-03T18:00:28Z

‎Publications: Added another publication

Christoph: /* Research Completed */ format

2006-02-01T19:51:48Z

‎Research Completed: format

← Older revision		Revision as of 04:06, 30 June 2016
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−	I have ~~been doing~~ '''academic research''' (or '''scientific research''') full time ~~since~~ May of 2000~~. I have done this research~~ at ~~five~~ academic institutions ~~to date~~.	+	I have done '''academic research''' (or '''scientific research''') full-time from May 2000 to November 2012 at seven academic institutions/universities worldwide.

	== Research Completed ==		== Research Completed ==

@@ Line 3: / Line 3: @@
 == Research Completed ==
 Below is a list of the academic institutions I have done research at to date (in reverse chronological order):
+{{research completed}}
-* '''[[Dr. Carlos J. Camacho Laboratory]]''', Center for Computational Biology and Bioinformatics, University of Pittsburgh, USA, March 2006-present (''in absentia'').
-* '''[[Dr. Rasmus Nielsen Laboratory]]''', Centre for Bioinformatics, København Universitet, Denmark, December 2005–February 2006.
-* '''[[Dr. David W. Ussery Laboratory]]''', Center for Biological Sequence Analysis, Danmarks Tekniske Universitet, Denmark, August 2005–November 2005.
-* '''[[Dr. Carlos J. Camacho Laboratory]]''', Center for Computational Biology and Bioinformatics, University of Pittsburgh, USA, October 2004–July 2005.
-* '''[[Dr. Alex Rich Laboratory]]''', Dept. of Biology, Massachusetts Institute of Technology, USA, Summer 2002/December 2002.
-* '''[[Dr. P. Shing Ho Laboratory]]''', Dept. of Biochemistry &amp; Biophysics, Oregon State University, USA, May 2000–September 2004.
 == Publications ==
-* '''P. Christoph Champ''', Tim T. Binnewies, N. Nielsen, Guy Zinman, Kristoffer Kiil, Hang Wu, Jon Bohlin and David W. Ussery (2006). Genome update: purine strand bias in 280 bacterial chromosomes. [http://mic.sgmjournals.org/future/152.3.shtml ''Microbiology'', '''152(3)''':579-583]. [[http://www.hubmed.org/display.cgi?uids=16514138 HubMed]]
+{{publications}}
-* Carlos J. Camacho, Ma H, and '''P. Christoph Champ''' (2006). Scoring a diverse set of high-quality docked conformations: A metascore based on electrostatic and desolvation interactions. [http://www3.interscience.wiley.com/cgi-bin/abstract/112467717/ABSTRACT?CRETRY=1&SRETRY=0 ''Proteins'', '''63(4)''':868-77]. [[http://www.hubmed.org/display.cgi?uids=16506242 HubMed]]
-* '''P. Christoph Champ''', Sandor Maurice, Jeffery M. Vargason, Tracy Camp, and P. Shing Ho (2004). Distributions of Z-DNA and nuclear factor I in human chromosome 22: a model for coupled transcriptional regulation. [http://nar.oupjournals.org/cgi/content/abstract/32/22/6501 ''Nucleic Acids Research'', '''32(22)''':6501-6510]. [[http://www.hubmed.org/display.cgi?uids=15598822 HubMed]] ([http://gac-web.cgrb.oregonstate.edu/zDNA/ The Online server of ZHunt can be found here])
-** <u>Citations</u>:
-*** Liu H, Mulholland N, Fu H, Zhao K (2006). Cooperative activity of BRG1 and Z-DNA formation in chromatin remodeling. ''Mol Cell Biol'', '''26(7)''':2550-9 .
-*** Ha SC, Lowenhaupt K, Rich A, Kim YG, Kim KK (2005). Crystal structure of a junction between B-DNA and Z-DNA reveals two extruded bases. ''Nature'', '''437''':1183-1186.
-*** Kwon JA, Rich A (2005). Biological function of the vaccinia virus Z-DNA-binding protein E3L: Gene transactivation and antiapoptotic activity in HeLa cells. ''Proc Natl Acad Sci USA'', '''102''':12759-12764.
 == Curriculum Vitae ==

@@ Line 15: / Line 15: @@
 * Carlos J. Camacho, Ma H, and '''P. Christoph Champ''' (2006). Scoring a diverse set of high-quality docked conformations: A metascore based on electrostatic and desolvation interactions. [http://www3.interscience.wiley.com/cgi-bin/abstract/112467717/ABSTRACT?CRETRY=1&SRETRY=0 ''Proteins'', '''63(4)''':868-77]. [[http://www.hubmed.org/display.cgi?uids=16506242 HubMed]]
 * '''P. Christoph Champ''', Sandor Maurice, Jeffery M. Vargason, Tracy Camp, and P. Shing Ho (2004). Distributions of Z-DNA and nuclear factor I in human chromosome 22: a model for coupled transcriptional regulation. [http://nar.oupjournals.org/cgi/content/abstract/32/22/6501 ''Nucleic Acids Research'', '''32(22)''':6501-6510]. [[http://www.hubmed.org/display.cgi?uids=15598822 HubMed]] ([http://gac-web.cgrb.oregonstate.edu/zDNA/ The Online server of ZHunt can be found here])
-** Citations:
+** <u>Citations</u>:
 *** Liu H, Mulholland N, Fu H, Zhao K (2006). Cooperative activity of BRG1 and Z-DNA formation in chromatin remodeling. ''Mol Cell Biol'', '''26(7)''':2550-9 .
 *** Ha SC, Lowenhaupt K, Rich A, Kim YG, Kim KK (2005). Crystal structure of a junction between B-DNA and Z-DNA reveals two extruded bases. ''Nature'', '''437''':1183-1186.

@@ Line 11: / Line 11: @@
 * '''[[Dr. P. Shing Ho Laboratory]]''', Dept. of Biochemistry &amp; Biophysics, Oregon State University, USA, May 2000–September 2004.
-==Publications==
+== Publications ==
-* '''P. Christoph Champ''', Tim T. Binnewies, N. Nielsen, Guy Zinman, Kristoffer Kiil, Hang Wu, Jon Bohlin and David W. Ussery (2006). Genome update: purine strand bias in 280 bacterial chromosomes. [http://mic.sgmjournals.org/future/152.3.shtml ''Microbiology'', '''152(3)''':579-583].
+* '''P. Christoph Champ''', Tim T. Binnewies, N. Nielsen, Guy Zinman, Kristoffer Kiil, Hang Wu, Jon Bohlin and David W. Ussery (2006). Genome update: purine strand bias in 280 bacterial chromosomes. [http://mic.sgmjournals.org/future/152.3.shtml ''Microbiology'', '''152(3)''':579-583]. [[http://www.hubmed.org/display.cgi?uids=16514138 HubMed]]
-* Carlos J. Camacho, Ma H, and '''P. Christoph Champ''' (2006). Scoring a diverse set of high-quality docked conformations: A metascore based on electrostatic and desolvation interactions. [http://www3.interscience.wiley.com/cgi-bin/abstract/112467717/ABSTRACT?CRETRY=1&SRETRY=0 ''Proteins'', '''63(4)''':868-77].
+* Carlos J. Camacho, Ma H, and '''P. Christoph Champ''' (2006). Scoring a diverse set of high-quality docked conformations: A metascore based on electrostatic and desolvation interactions. [http://www3.interscience.wiley.com/cgi-bin/abstract/112467717/ABSTRACT?CRETRY=1&SRETRY=0 ''Proteins'', '''63(4)''':868-77]. [[http://www.hubmed.org/display.cgi?uids=16506242 HubMed]]
-* '''P. Christoph Champ''', Sandor Maurice, Jeffery M. Vargason, Tracy Camp, and P. Shing Ho (2004). Distributions of Z-DNA and nuclear factor I in human chromosome 22: a model for coupled transcriptional regulation. ''[http://nar.oupjournals.org/cgi/content/abstract/32/22/6501 Nucleic Acids Research'', '''32(22)''':6501-6510]. ([http://gac-web.cgrb.oregonstate.edu/zDNA/ The Online server of ZHunt can be found here])
+* '''P. Christoph Champ''', Sandor Maurice, Jeffery M. Vargason, Tracy Camp, and P. Shing Ho (2004). Distributions of Z-DNA and nuclear factor I in human chromosome 22: a model for coupled transcriptional regulation. [http://nar.oupjournals.org/cgi/content/abstract/32/22/6501 ''Nucleic Acids Research'', '''32(22)''':6501-6510]. [[http://www.hubmed.org/display.cgi?uids=15598822 HubMed]] ([http://gac-web.cgrb.oregonstate.edu/zDNA/ The Online server of ZHunt can be found here])
-** <u>Citations</u>:
+** Citations:
-*** Ha SC, Lowenhaupt K, Rich A, Kim YG, and Kim KK (2005). Crystal structure of a junction between B-DNA and Z-DNA reveals two extruded bases. ''Nature'' '''437''':1183-1186.
+*** Liu H, Mulholland N, Fu H, Zhao K (2006). Cooperative activity of BRG1 and Z-DNA formation in chromatin remodeling. ''Mol Cell Biol'', '''26(7)''':2550-9 .
-*** Kwon JA, Rich A (2005). Biological function of the vaccinia virus Z-DNA-binding protein E3L: Gene transactivation and antiapoptotic activity in HeLa cells. ''Proc Natl Acad Sci USA'' '''102''':12759-12764.
+*** Ha SC, Lowenhaupt K, Rich A, Kim YG, Kim KK (2005). Crystal structure of a junction between B-DNA and Z-DNA reveals two extruded bases. ''Nature'', '''437''':1183-1186.
 == Curriculum Vitae ==

@@ Line 13: / Line 13: @@
 ==Publications==
 * '''P. Christoph Champ''', Tim T. Binnewies, N. Nielsen, Guy Zinman, Kristoffer Kiil, Hang Wu, Jon Bohlin and David W. Ussery (2006). Genome update: purine strand bias in 280 bacterial chromosomes. [http://mic.sgmjournals.org/future/152.3.shtml ''Microbiology'', '''152(3)''':579-583].
-* Carlos J. Camacho, Ma H, and '''P. Christoph Champ''' (2006). Scoring a diverse set of high-quality docked conformations: A metascore based on electrostatic and desolvation interactions. [http://www3.interscience.wiley.com/cgi-bin/abstract/112467717/ABSTRACT?CRETRY=1&SRETRY=0 ''Proteins''].
+* Carlos J. Camacho, Ma H, and '''P. Christoph Champ''' (2006). Scoring a diverse set of high-quality docked conformations: A metascore based on electrostatic and desolvation interactions. [http://www3.interscience.wiley.com/cgi-bin/abstract/112467717/ABSTRACT?CRETRY=1&SRETRY=0 ''Proteins'', '''63(4)''':868-77].
 * '''P. Christoph Champ''', Sandor Maurice, Jeffery M. Vargason, Tracy Camp, and P. Shing Ho (2004). Distributions of Z-DNA and nuclear factor I in human chromosome 22: a model for coupled transcriptional regulation. ''[http://nar.oupjournals.org/cgi/content/abstract/32/22/6501 Nucleic Acids Research'', '''32(22)''':6501-6510]. ([http://gac-web.cgrb.oregonstate.edu/zDNA/ The Online server of ZHunt can be found here])
 ** <u>Citations</u>: