http://wiki.christophchamp.com/index.php?action=history&feed=atom&title=MUSCLE 2026-04-30T09:32:14Z Revision history for this page on the wiki MediaWiki 1.26.2 http://wiki.christophchamp.com/index.php?title=MUSCLE&diff=4300&oldid=prev 2007-07-30T07:51:00Z

<p>‎<span dir="auto"><span class="autocomment">See also</span></span></p> <table class='diff diff-contentalign-left'> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr style='vertical-align: top;' lang='en'> <td colspan='2' style="background-color: white; color:black; text-align: center;">← Older revision</td> <td colspan='2' style="background-color: white; color:black; text-align: center;">Revision as of 07:51, 30 July 2007</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l10" >Line 10:</td> <td colspan="2" class="diff-lineno">Line 10:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>*[[Clustal]]</div></td><td class='diff-marker'>&#160;</td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>*[[Clustal]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>*[[T-Coffee]]</div></td><td class='diff-marker'>&#160;</td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>*[[T-Coffee]]</div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">*[http://www.biophys.kyoto-u.ac.jp/~katoh/programs/align/mafft/ MAFFT] &amp;mdash; Multiple alignment program for amino acid or nucleotide sequences</ins></div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'>&#160;</td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>==References==</div></td><td class='diff-marker'>&#160;</td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>==References==</div></td></tr> </table>

Christoph http://wiki.christophchamp.com/index.php?title=MUSCLE&diff=4295&oldid=prev 2007-07-30T07:18:28Z

<p></p> <p><b>New page</b></p><div>'''MUSCLE''' ('''mu'''ltiple '''s'''equence '''c'''omparison by '''l'''og-'''e'''xpectation) is a multiple sequence alignment program for protein and nucleotide sequences.&lt;ref name=&quot;Edgar2004a&quot;&gt;Edgar RC (2004). &quot;MUSCLE: multiple sequence alignment with high accuracy and high throughput&quot;. ''Nucleic Acids Research, 32(5):1792-97''.&lt;/ref&gt;&lt;ref name=&quot;Edgar2004b&quot;&gt;Edgar RC (2004). &quot;MUSCLE: a multiple sequence alignment method with reduced time and space complexity&quot;. ''BMC Bioinformatics, 5(1):113''.&lt;/ref&gt;<br /> <br /> ==Usage==<br /> see: [http://www.drive5.com/muscle/muscle.html MUSCLE User Guide] for details.<br /> ===Example===<br /> muscle -in seqs.fa -out seqs.afa<br /> <br /> ==See also==<br /> *[[wikipedia:Sequence alignment software]]<br /> *[[Clustal]]<br /> *[[T-Coffee]]<br /> <br /> ==References==<br /> &lt;references/&gt;<br /> ==External links==<br /> *[http://www.drive5.com/muscle/ Official website]<br /> *[http://phylogenomics.berkeley.edu/muscle/muscle_form.html MUSCLE Web Server]<br /> <br /> [[Category:Bioinformatics]]</div>

Christoph