Difference between revisions of "Talk:Make"

Revision as of 21:58, 17 October 2006

A list of random make/gmake/shell commands:

for pdbid in $(cat 1ACB.cph | gawk '{print $2}' | sort | uniq);\
        do wget http://www.rcsb.org/pdb/files/$pdbid.pdb.gz;
done
wait
for pdbid in *.gz;
        do gunzip $pdbid;
done
for pdbid in $(for pdbid in *.pdb; do basename $pdbid .pdb; done);
        do gmake $pdbid.fa;
done
for pdbid in *.fa;
        do perl multi_alignaa.pl 1ACB.fa $pdbid >> 1ACB.cph.fa;
done