Difference between revisions of "GnuPlot"
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<tt>gnuplot_i</tt> is an interface that allows a running program in [[Fortran]] or C to pass data to <tt>GnuPlot</tt> for plotting. <tt>gnuplot_i</tt> can be downloaded here: http://ndevilla.free.fr/gnuplot/ | <tt>gnuplot_i</tt> is an interface that allows a running program in [[Fortran]] or C to pass data to <tt>GnuPlot</tt> for plotting. <tt>gnuplot_i</tt> can be downloaded here: http://ndevilla.free.fr/gnuplot/ | ||
− | == | + | ==Examples== |
− | + | ''Note: Most of the following examples were taken directly from [http://sparky.rice.edu/~hartigan/gnuplot.html Patrick Hartigan's] site. They have been modified.'' | |
− | + | ||
− | + | ||
− | + | ||
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− | + | ||
+ | ===Running from a file of commands=== | ||
+ | Probably the easiest way to work; edit the command file in one shell and have a second shell running GnuPlot where I simply keep loading in the new command file and it makes a new eps file each time I load, and then a third shell running ghostview to view the eps file. To load a command file: | ||
+ | load 'junk.gnu' | ||
+ | |||
+ | ===Limits=== | ||
+ | <pre> | ||
+ | # the noautoscale, xrange, yrange change the x- and y-limits | ||
+ | set noautoscale | ||
+ | set xrange [0.5:10] | ||
+ | set yrange [300:480] | ||
+ | # or plot ranges directly | ||
+ | plot 'junk.dat' [0.5:10][300:480] | ||
+ | # or choose autoscale for one axis only | ||
+ | set autoscale x | ||
+ | </pre> | ||
+ | ===Style of plot=== | ||
+ | <pre> | ||
+ | # choice of points, lines, linespoints, steps, boxes, errorbars, impulses, etc. | ||
+ | # for errorbar options type 'help plot errorbars' | ||
+ | set data style linespoints | ||
+ | </pre> | ||
+ | ===Point size and type=== | ||
+ | <pre> | ||
+ | # pointsize is to expand points | ||
+ | set pointsize 2.5 | ||
+ | # type 'test' to see the colours and point types available | ||
+ | # lt is for colour of the points: | ||
+ | # -1=black 1=red 2=grn 3=blue 4=purple | ||
+ | # 5=aqua 6=brn 7=orange 8=light-brn | ||
+ | # pt gives a particular point type: | ||
+ | # 1=diamond 2=+ 3=square 4=X 5=triangle 6=* | ||
+ | # postscipt: | ||
+ | # 1=+, 2=X, 3=*, 4=square, 5=filled square, 6=circle, | ||
+ | # 7=filled circle, 8=triangle, 9=filled triangle, etc. | ||
+ | </pre> | ||
+ | ===Line colours / styles=== | ||
+ | <pre> | ||
+ | # type 'test' to see the colours and point types available. | ||
+ | # Differs from x11 to postscript | ||
+ | # lt chooses a particular line type: | ||
+ | # -1=black 1=red 2=grn 3=blue 4=purple | ||
+ | # 5=aqua 6=brn 7=orange 8=light-brn | ||
+ | # lt must be specified before pt for coloured points | ||
+ | # for PostScript: | ||
+ | # -1=normal, 1=grey, 2=dashed, 3=hashed, 4=dot, 5=dot-dash | ||
+ | # lw chooses a line width 1=normal, can use 0.8, 0.3, 1.5, 3, etc. | ||
+ | # ls chooses a line style | ||
+ | plot sin(x)k with linespoints lt 2 pt 4 | ||
+ | </pre> | ||
+ | ===Draw a line of arrow between two points=== | ||
+ | <pre> | ||
+ | # use the arrow command with nohead to draw just a line: | ||
+ | set arrow from 1,2 to 4,8.4 nohead lt -1 lw 1.2 | ||
+ | </pre> | ||
+ | ===Storing and using a line type and point type=== | ||
+ | The linestyle command is a shortcut to changing the points and line types each time. | ||
+ | <pre> | ||
+ | # to store the current setup | ||
+ | set linestyle | ||
+ | # to view the stored linestyles | ||
+ | show linestyle | ||
+ | # to use it | ||
+ | plot sin(x) ls 1 | ||
+ | # to erase the styles | ||
+ | set nolinestyle | ||
+ | </pre> | ||
+ | ===Vectors / plotting data from a file / plotting single points=== | ||
+ | Instead of loading variables into a vector and multiplying vectors together, I usually just make a table where the values of each vector are represented by a column. Then follow the description below to do arithmetic on the columns with [[awk]] or the 'plot using' command. | ||
+ | <pre> | ||
+ | # To make a table that has column1 = 0.05, 0.1, ... 1.0; column2 = 2*column1+14 | ||
+ | yes | head -20 | awk '{print NR/20., NR/10.+14}' >! table.dat | ||
+ | |||
+ | # If you are using Solaris, you may not have 'yes', so code it (fortran) via | ||
+ | open(unit=0,file="/dev/null") | ||
+ | 10 write(6,'("y")') | ||
+ | goto 10 | ||
+ | end | ||
+ | |||
+ | # The 1:2 means plot x from column 1, y from column 2 | ||
+ | plot 'table.dat' using 1:2 | ||
+ | |||
+ | # Note, to do SM-like arithmetic on columns, | ||
+ | # where $n means column n | ||
+ | plot 'table.dat' using ($3/$1):($2*134.44) | ||
+ | |||
+ | # to plot lines 4-20 from a file with filled square points and double-weight solid lines | ||
+ | # 'w lp lt 1 lw 2 pt 5' means 'with linespoints linetype 1 lineweight 2 pointtype 5' | ||
+ | plot "< awk 'NR>3 && NR<20 {print $1,$2}' axis.dat" w lp lt 1 lw 2 pt 5 | ||
+ | |||
+ | # to place a single 'X' point at x=4, y=5 (useful for keys) | ||
+ | plot "< echo 4 5" w p pt 2 | ||
+ | </pre> | ||
+ | |||
+ | Comments in a file begin with '#' and are ignored. For multiple graphs, a blank line in a file is interpreted as 'lift the pen'. Two blank lines indicate a new 'index'. To plot only the data from indices 4 through 6 in a file, where index 0 is the first index: | ||
+ | plot 'file' index 4:6 | ||
+ | |||
+ | ===Plotting a function=== | ||
+ | <pre> | ||
+ | # first define the function, then plot | ||
+ | plot f(x) = sin(x*a), a=0.2, f(x) with points | ||
+ | # Make 2 plots, first with points and second with a line, note abbreviations w, l, p | ||
+ | plot f(x) = sin(x*a), a=0.2, f(x) w p, a=0.4, f(x) w l | ||
+ | </pre> | ||
+ | ===Making a square output graph=== | ||
+ | |||
+ | set size square | ||
+ | |||
+ | ===Multiple graphs and lines=== | ||
+ | <pre> | ||
+ | set multiplot # Do at beginning, after 'set term' and 'set output' commands | ||
+ | # then do 'set origin', 'set tmargin', 'set size' etc. for each | ||
+ | # separate plot | ||
+ | set nomultiplot #The last line in the command file | ||
+ | # location and sizes of smaller plots, viewport is [0:1,0:1] | ||
+ | set size 0.5, 0.5 | ||
+ | set origin 0.0, 0.5 | ||
+ | # to eliminate offsets between plots (units are character sizes) | ||
+ | set tmargin 0 | ||
+ | set bmargin 0 | ||
+ | # losing the labels? include them before the last plot command | ||
+ | # | ||
+ | # All labels apply to all subsequent graphs in multiplot mode. | ||
+ | # To relabel each graph individually, shut off the labels after 'set origin' via | ||
+ | set nolabel | ||
+ | # You can also name, and then shut off an individual label, e.g. | ||
+ | set label 2 "string" at 3,4 | ||
+ | set nolabel 2 | ||
+ | # By default labels are numbered sequentially throughout the command file. | ||
+ | </pre> | ||
+ | ===[[Latex|LaTeX]] of multiple plots=== | ||
+ | Either make a single plot with multiplot as above, or make each plot individually and combine in the latex document. The following from the [http://t16web.lanl.gov/Kawano/gnuplot/index-e.html Kawano site]: | ||
+ | <pre> | ||
+ | \documentclass{article} | ||
+ | \usepackage{graphics} | ||
+ | \begin{document} | ||
+ | \begin{figure} | ||
+ | \begin{center} | ||
+ | \begin{tabular}{cc} | ||
+ | \resizebox{60mm}{!}{\includegraphics{test1.eps}} & | ||
+ | \resizebox{60mm}{!}{\includegraphics{test2.eps}} \\ | ||
+ | \resizebox{60mm}{!}{\includegraphics{test3.eps}} & | ||
+ | \resizebox{60mm}{!}{\includegraphics{test4.eps}} \\ | ||
+ | \end{tabular} | ||
+ | \caption{This is sample figures.} | ||
+ | \label{test4} | ||
+ | \end{center} | ||
+ | \end{figure} | ||
+ | \end{document} | ||
+ | </pre> | ||
+ | ===Fits to data=== | ||
+ | <pre> | ||
+ | f1(x) = a1*tanh(x/b1) # define the function to be fit | ||
+ | a1 = 300; b1 = 0.005; # initial guess for a1 and b1 | ||
+ | fit f1(x) 'force.dat' using 1:2 via a1, b1 | ||
+ | |||
+ | f(x) = a*x + b #plot the data and a linear fit | ||
+ | fit f(x) 'try.dat' using 1:2 via a,b | ||
+ | plot 'try.dat' using 1:2 w p pt 3, f(x) | ||
+ | </pre> | ||
+ | ===Tic mark control=== | ||
+ | <pre> | ||
+ | # mytics is number of small intervals marked between major tics in y | ||
+ | # if you want 4 minor tics between each major tic in y | ||
+ | set mytics 4 | ||
+ | # ytics controls major tics on y-axis | ||
+ | # the logscale is to plot logs | ||
+ | # a typical log plot will have | ||
+ | set logscale x | ||
+ | set xrange [1:21] | ||
+ | set xtics 1,10,100 | ||
+ | set mxtics 10 | ||
+ | # to shut off tics: | ||
+ | set noxtics | ||
+ | set noytics | ||
+ | # For tic marks every 0.02, when x increases to left | ||
+ | set xtics 3.64,-0.02,3.40 | ||
+ | # Various specific tic marks and their labels | ||
+ | set xtics ("low" 0, "medium" 50, "high" 100) | ||
+ | set xtics (1,2,4,8,16,32,64,128,256,512,1024) | ||
+ | set ytics ("bottom" 0, "" 10, "top" 20) | ||
+ | # size of tic marks | ||
+ | # first number is for major tics, second for minor | ||
+ | # defaults are 1 and 0.5, negative numbers put tics on outside | ||
+ | set ticscale 2 1 | ||
+ | </pre> | ||
+ | ===Box / axis label controls=== | ||
+ | The default labels on the graph are often too small. To make the default size bigger define it in the terminal command, as below. For some inexplicable reason here the fontname is in quotes, then a space, then the number, as opposed to a quote, fontname, comma, number, endquote, the way it normally behaves. | ||
+ | <pre> | ||
+ | # The terminal command is the first line in the command file | ||
+ | set terminal postscript eps enhanced "Helvetica" 30 | ||
+ | # axis labels | ||
+ | set xlabel "Distance (AU)" font "Helvetica,24" | ||
+ | # To turn off x-labels of tic marks | ||
+ | set format x "" | ||
+ | # In a log plot, make x-axis labels 10, 100, 1000, and then 1e4, 1e5... | ||
+ | # The '3' controls where the format swtiches to exponential | ||
+ | set format x "%.3g" | ||
+ | # To not draw the box when you plot | ||
+ | set noborder | ||
+ | # to eliminate offsets between plots (units are character sizes) | ||
+ | # see multiple plots | ||
+ | set tmargin 2 | ||
+ | set bmargin 2 | ||
+ | </pre> | ||
+ | ===Labels=== | ||
+ | <pre> | ||
+ | # Example of a label on the x-axis (the 22 is point size; Bold is another font to try) | ||
+ | set label "3.52" at 3.52,-1.65 center font "Helvetica,22" | ||
+ | # Example of a y-axis label | ||
+ | set label "log (L/L_\o)" at 3.66,-0.5 center rotate font "Helvetica,24" | ||
+ | # to put label "y=x" at location (1,2), rotated by 43 degrees: | ||
+ | set label "y=x" at 1,2 rotate by 43 font "Helvetica,20" | ||
+ | # same as above but going to the right of (1,2): | ||
+ | set label "y=x" at 1,2 right | ||
+ | # to put label "y=x" at center of graph: | ||
+ | set label "y=x" at graph 0.5,0.5 | ||
+ | # Inserting special symbols, greek letters and italics, subscripts, superscripts: | ||
+ | # These only look right on the final .eps file if you include the | ||
+ | # enhanced option: set term postscript eps enhanced -- add this to the fig.gnu file | ||
+ | # along with set output 'fig.eps', then run gnuplot fig.gnu in another window and | ||
+ | # gv fig.eps in a third window | ||
+ | set xlabel 'Flux, F_{/Symbol L} ' | ||
+ | set ylabel 'Intensity, {/Times-Italic I}_o' | ||
+ | set xlabel "N_{e} (cm^{-3})" | ||
+ | # {/*0.75 K} is a K at three-quarters of whatever fontsize is currently in effect. | ||
+ | # {/Symbol=20 G} is a 20-point GAMMA | ||
+ | # For special symbols specify \char-code (in octal) | ||
+ | # e.g., {/Symbol \245} is the symbol for infinity. | ||
+ | # {/Symbol \305} is the Earth | ||
+ | # {/Symbol \360} is the degree symbol | ||
+ | # {\247} is the section symbol | ||
+ | # There does not appear to be a sign for the Sun | ||
+ | # These are all stored in /usr/local/gnuplot-3.7/docs/ps | ||
+ | </pre> | ||
+ | For Angstroms, set encoding <code>iso_8859_1, {\305};</code> then set encoding default | ||
+ | |||
+ | To get a space the size of a string type <code>&{string}</code> [enhanced ps only] | ||
+ | |||
+ | If you are losing labels on multiple plots, see [[GnuPlot#Multiple graphs and lines|Multiple graphs and lines]] (section above). | ||
+ | |||
+ | ===Erase screen=== | ||
+ | |||
+ | clear | ||
+ | |||
+ | ===Grid=== | ||
+ | |||
+ | # this does a grid | ||
+ | set grid | ||
+ | |||
+ | ===Minimum values=== | ||
+ | |||
+ | # set smaller values than this to zero | ||
+ | set zero 1e-30 | ||
+ | |||
+ | ===Default label and key for graph=== | ||
+ | <pre> | ||
+ | # to turn off the annoying label in the upper right corner | ||
+ | set nokey | ||
+ | # this key has a title | ||
+ | set key 0.018,150 title "F(x) = A tanh (x/B)" | ||
+ | # when you plot with a 'title' this goes into the key | ||
+ | plot "force.dat" using 1:2 title 'Column data' with points 3, \ | ||
+ | "force.dat" using 1:3 title 'Beam data' with points 4, \ | ||
+ | a1 * tanh( x / b1 ) title 'Column-fit: A=309, B=0.00227', \ | ||
+ | a2 * tanh( x / b2 ) title 'Beam-fit: A=260, B=0.00415' | ||
+ | </pre> | ||
+ | ===Title=== | ||
+ | |||
+ | # multiple lines to the title | ||
+ | set title "Force Deflection Data \n and curve fit" | ||
+ | |||
+ | ===Setting date/time as xtics=== | ||
+ | Let's say your data file, <code>foo.dat</code>, looks like this: | ||
+ | # Date Value | ||
+ | 3 04-07 100 | ||
+ | ... | ||
+ | |||
+ | You can plot the date field on the x-axis (i.e., as "xtics"), with the following set of commands: | ||
+ | set xdata time | ||
+ | set timefmt "%m-%y" | ||
+ | set format x "%m/%y" | ||
+ | unset key | ||
+ | set grid | ||
+ | set ylabel "value" | ||
+ | set xlabel "date (mm/yy)" | ||
+ | set title "My Values Plot" | ||
+ | plot "foo.dat" u 2:3 w l | ||
+ | set term png | ||
+ | set output 'foo.png' | ||
+ | replot | ||
+ | |||
+ | *Here is another example: | ||
+ | # input "foo.dat" format: 2009-04 1000 | ||
+ | set terminal svg font "Bitstream Vera Sans,12" size 600,400 | ||
+ | set output "foo.svg" | ||
+ | |||
+ | set xdata time | ||
+ | set timefmt "%Y-%m" | ||
+ | set xrange ["1990-01":"2009-04"] | ||
+ | set format x "%Y" | ||
+ | set key off | ||
+ | unset mxtics | ||
+ | |||
+ | set xtics nomirror | ||
+ | set ytics nomirror | ||
+ | set grid | ||
+ | set border 3 | ||
+ | |||
+ | plot "foo.dat" using 1:2 \ | ||
+ | with line linetype rgbcolor "red" linewidth 2 | ||
+ | |||
+ | ===Store a [[PostScript]] output file=== | ||
+ | <pre> | ||
+ | # use the 'set output' command, the second command in the file | ||
+ | gnuplot> set terminal postscript eps enhanced | ||
+ | Terminal type set to 'postscript' | ||
+ | Options are 'eps enhanced monochrome dashed defaultplex "Helvetica" 14' | ||
+ | gnuplot> set output "file.eps" | ||
+ | gnuplot> replot | ||
+ | gnuplot> set output # set output back to default | ||
+ | gnuplot> set terminal x11 # ditto for terminal type | ||
+ | </pre> | ||
+ | ===Hardcopies: landscape plots, thicker lines, location of plots, etc.=== | ||
+ | The PostScript commands used in GnuPlot are described in <code>/usr/local/gnuplot/docs/ps/ps_file.doc</code>. You can edit this file in several places easily. For example, '<code>/gnulinewidth 5.000 def</code>' sets the line thicknesses, and '<code>50 50 translate</code>' '<code>0.050 0.050 scale</code>' set the location and scale of the plot. The PostScript commands used in gnuplot are described in: | ||
+ | /usr/local/gnuplot/docs/ps/ps_file.doc | ||
+ | |||
+ | You can edit this file in several places easily. For example, '<code>/gnulinewidth 5.000 def</code>' sets the line thicknesses, and '<code>50 50 translate</code>' '<code>0.050 0.050 scale</code>' set the location and scale of the plot. The default size seems to come out better without the '<code>eps</code>', i.e., 'set terminal postscript enhanced'. Try '<code>90 rotate</code>' down next to the translate commands to spin the graph 90 degrees. | ||
+ | |||
+ | ==Calling GnuPlot from Perl== | ||
+ | You can call gnuplot by using a short [[Perl]]-script like the following: | ||
+ | |||
+ | #!/usr/bin/perl -w | ||
+ | open (GP, "|/usr/bin/gnuplot -persist") or die "no gnuplot"; | ||
+ | # force buffer to flush after each write | ||
+ | use FileHandle; | ||
+ | GP->autoflush(1); | ||
+ | print GP,"set term x11;plot '/tmp/foo.dat' with lines\n"; | ||
+ | close GP | ||
+ | |||
+ | ==External links== | ||
+ | *[http://www.gnuplot.info/ gnuplot Central] contains links to the FAQ and to download locations | ||
+ | *[http://gnuplot.sourceforge.net/demo/ gnuplot demo plots] — demo scripts for gnuplot version 4.2 | ||
+ | *[http://skuld.bmsc.washington.edu/people/merritt/gnuplot/ gnuplot demos] — maintained by [[Dr. Ethan A. Merritt Laboratory|Dr. Ethan A. Merritt]] | ||
+ | *[http://gnuplot-py.sourceforge.net/ Gnuplot.py] | ||
+ | *[http://meta.wikimedia.org/wiki/Gnuplot Gnuplot mediawiki extension] | ||
+ | ===Tutorials=== | ||
+ | *[http://www.gnuplotting.org/ Gnuplotting] — Create scientific plots using Gnuplot | ||
+ | *[http://t16web.lanl.gov/Kawano/gnuplot/index-e.html Kawano: "Not so frequently asked questions"] about GnuPlot (various tips). | ||
+ | *[http://www-128.ibm.com/developerworks/library/l-gnuplot/ Visualize your data with gnuplot] — IBM tutorial | ||
+ | *[http://www.cs.unc.edu/~jeffay/dirt/FAQ/gnuplot.html Gnuplot Tips] — mouse command reference | ||
+ | *[http://www.sci.muni.cz/~mikulik/gnuplot.html P. Mikulik's tutorial] | ||
+ | *[[wikipedia:Gnuplot]] | ||
+ | |||
+ | [[Category:Graphics software]] | ||
[[Category:Linux Command Line Tools]] | [[Category:Linux Command Line Tools]] | ||
[[Category:Technical and Specialized Skills]] | [[Category:Technical and Specialized Skills]] |
Latest revision as of 07:16, 20 April 2012
GnuPlot is a versatile command line programme that can generate two- and three-dimensional plots of functions and data. The programme runs on all major computers and operating systems. GnuPlot is a program with a fairly long history, dating back to 1986.
GnuPlot can produce output directly on screen, or in many formats of graphics files, among which PNG, EPS, SVG, JPEG and many others. The programme can be used both interactively and in batch mode using scripts. The programme is well supported and documented. Extensive help can also be found on the Internet.
GnuPlot is used as the plotting engine of GNU Octave.
Contents
- 1 gnuplot_i ("gnuplot_pipes")
- 2 Examples
- 2.1 Running from a file of commands
- 2.2 Limits
- 2.3 Style of plot
- 2.4 Point size and type
- 2.5 Line colours / styles
- 2.6 Draw a line of arrow between two points
- 2.7 Storing and using a line type and point type
- 2.8 Vectors / plotting data from a file / plotting single points
- 2.9 Plotting a function
- 2.10 Making a square output graph
- 2.11 Multiple graphs and lines
- 2.12 LaTeX of multiple plots
- 2.13 Fits to data
- 2.14 Tic mark control
- 2.15 Box / axis label controls
- 2.16 Labels
- 2.17 Erase screen
- 2.18 Grid
- 2.19 Minimum values
- 2.20 Default label and key for graph
- 2.21 Title
- 2.22 Setting date/time as xtics
- 2.23 Store a PostScript output file
- 2.24 Hardcopies: landscape plots, thicker lines, location of plots, etc.
- 3 Calling GnuPlot from Perl
- 4 External links
gnuplot_i ("gnuplot_pipes")
gnuplot_i is an interface that allows a running program in Fortran or C to pass data to GnuPlot for plotting. gnuplot_i can be downloaded here: http://ndevilla.free.fr/gnuplot/
Examples
Note: Most of the following examples were taken directly from Patrick Hartigan's site. They have been modified.
Running from a file of commands
Probably the easiest way to work; edit the command file in one shell and have a second shell running GnuPlot where I simply keep loading in the new command file and it makes a new eps file each time I load, and then a third shell running ghostview to view the eps file. To load a command file:
load 'junk.gnu'
Limits
# the noautoscale, xrange, yrange change the x- and y-limits set noautoscale set xrange [0.5:10] set yrange [300:480] # or plot ranges directly plot 'junk.dat' [0.5:10][300:480] # or choose autoscale for one axis only set autoscale x
Style of plot
# choice of points, lines, linespoints, steps, boxes, errorbars, impulses, etc. # for errorbar options type 'help plot errorbars' set data style linespoints
Point size and type
# pointsize is to expand points set pointsize 2.5 # type 'test' to see the colours and point types available # lt is for colour of the points: # -1=black 1=red 2=grn 3=blue 4=purple # 5=aqua 6=brn 7=orange 8=light-brn # pt gives a particular point type: # 1=diamond 2=+ 3=square 4=X 5=triangle 6=* # postscipt: # 1=+, 2=X, 3=*, 4=square, 5=filled square, 6=circle, # 7=filled circle, 8=triangle, 9=filled triangle, etc.
Line colours / styles
# type 'test' to see the colours and point types available. # Differs from x11 to postscript # lt chooses a particular line type: # -1=black 1=red 2=grn 3=blue 4=purple # 5=aqua 6=brn 7=orange 8=light-brn # lt must be specified before pt for coloured points # for PostScript: # -1=normal, 1=grey, 2=dashed, 3=hashed, 4=dot, 5=dot-dash # lw chooses a line width 1=normal, can use 0.8, 0.3, 1.5, 3, etc. # ls chooses a line style plot sin(x)k with linespoints lt 2 pt 4
Draw a line of arrow between two points
# use the arrow command with nohead to draw just a line: set arrow from 1,2 to 4,8.4 nohead lt -1 lw 1.2
Storing and using a line type and point type
The linestyle command is a shortcut to changing the points and line types each time.
# to store the current setup set linestyle # to view the stored linestyles show linestyle # to use it plot sin(x) ls 1 # to erase the styles set nolinestyle
Vectors / plotting data from a file / plotting single points
Instead of loading variables into a vector and multiplying vectors together, I usually just make a table where the values of each vector are represented by a column. Then follow the description below to do arithmetic on the columns with awk or the 'plot using' command.
# To make a table that has column1 = 0.05, 0.1, ... 1.0; column2 = 2*column1+14 yes | head -20 | awk '{print NR/20., NR/10.+14}' >! table.dat # If you are using Solaris, you may not have 'yes', so code it (fortran) via open(unit=0,file="/dev/null") 10 write(6,'("y")') goto 10 end # The 1:2 means plot x from column 1, y from column 2 plot 'table.dat' using 1:2 # Note, to do SM-like arithmetic on columns, # where $n means column n plot 'table.dat' using ($3/$1):($2*134.44) # to plot lines 4-20 from a file with filled square points and double-weight solid lines # 'w lp lt 1 lw 2 pt 5' means 'with linespoints linetype 1 lineweight 2 pointtype 5' plot "< awk 'NR>3 && NR<20 {print $1,$2}' axis.dat" w lp lt 1 lw 2 pt 5 # to place a single 'X' point at x=4, y=5 (useful for keys) plot "< echo 4 5" w p pt 2
Comments in a file begin with '#' and are ignored. For multiple graphs, a blank line in a file is interpreted as 'lift the pen'. Two blank lines indicate a new 'index'. To plot only the data from indices 4 through 6 in a file, where index 0 is the first index:
plot 'file' index 4:6
Plotting a function
# first define the function, then plot plot f(x) = sin(x*a), a=0.2, f(x) with points # Make 2 plots, first with points and second with a line, note abbreviations w, l, p plot f(x) = sin(x*a), a=0.2, f(x) w p, a=0.4, f(x) w l
Making a square output graph
set size square
Multiple graphs and lines
set multiplot # Do at beginning, after 'set term' and 'set output' commands # then do 'set origin', 'set tmargin', 'set size' etc. for each # separate plot set nomultiplot #The last line in the command file # location and sizes of smaller plots, viewport is [0:1,0:1] set size 0.5, 0.5 set origin 0.0, 0.5 # to eliminate offsets between plots (units are character sizes) set tmargin 0 set bmargin 0 # losing the labels? include them before the last plot command # # All labels apply to all subsequent graphs in multiplot mode. # To relabel each graph individually, shut off the labels after 'set origin' via set nolabel # You can also name, and then shut off an individual label, e.g. set label 2 "string" at 3,4 set nolabel 2 # By default labels are numbered sequentially throughout the command file.
LaTeX of multiple plots
Either make a single plot with multiplot as above, or make each plot individually and combine in the latex document. The following from the Kawano site:
\documentclass{article} \usepackage{graphics} \begin{document} \begin{figure} \begin{center} \begin{tabular}{cc} \resizebox{60mm}{!}{\includegraphics{test1.eps}} & \resizebox{60mm}{!}{\includegraphics{test2.eps}} \\ \resizebox{60mm}{!}{\includegraphics{test3.eps}} & \resizebox{60mm}{!}{\includegraphics{test4.eps}} \\ \end{tabular} \caption{This is sample figures.} \label{test4} \end{center} \end{figure} \end{document}
Fits to data
f1(x) = a1*tanh(x/b1) # define the function to be fit a1 = 300; b1 = 0.005; # initial guess for a1 and b1 fit f1(x) 'force.dat' using 1:2 via a1, b1 f(x) = a*x + b #plot the data and a linear fit fit f(x) 'try.dat' using 1:2 via a,b plot 'try.dat' using 1:2 w p pt 3, f(x)
Tic mark control
# mytics is number of small intervals marked between major tics in y # if you want 4 minor tics between each major tic in y set mytics 4 # ytics controls major tics on y-axis # the logscale is to plot logs # a typical log plot will have set logscale x set xrange [1:21] set xtics 1,10,100 set mxtics 10 # to shut off tics: set noxtics set noytics # For tic marks every 0.02, when x increases to left set xtics 3.64,-0.02,3.40 # Various specific tic marks and their labels set xtics ("low" 0, "medium" 50, "high" 100) set xtics (1,2,4,8,16,32,64,128,256,512,1024) set ytics ("bottom" 0, "" 10, "top" 20) # size of tic marks # first number is for major tics, second for minor # defaults are 1 and 0.5, negative numbers put tics on outside set ticscale 2 1
Box / axis label controls
The default labels on the graph are often too small. To make the default size bigger define it in the terminal command, as below. For some inexplicable reason here the fontname is in quotes, then a space, then the number, as opposed to a quote, fontname, comma, number, endquote, the way it normally behaves.
# The terminal command is the first line in the command file set terminal postscript eps enhanced "Helvetica" 30 # axis labels set xlabel "Distance (AU)" font "Helvetica,24" # To turn off x-labels of tic marks set format x "" # In a log plot, make x-axis labels 10, 100, 1000, and then 1e4, 1e5... # The '3' controls where the format swtiches to exponential set format x "%.3g" # To not draw the box when you plot set noborder # to eliminate offsets between plots (units are character sizes) # see multiple plots set tmargin 2 set bmargin 2
Labels
# Example of a label on the x-axis (the 22 is point size; Bold is another font to try) set label "3.52" at 3.52,-1.65 center font "Helvetica,22" # Example of a y-axis label set label "log (L/L_\o)" at 3.66,-0.5 center rotate font "Helvetica,24" # to put label "y=x" at location (1,2), rotated by 43 degrees: set label "y=x" at 1,2 rotate by 43 font "Helvetica,20" # same as above but going to the right of (1,2): set label "y=x" at 1,2 right # to put label "y=x" at center of graph: set label "y=x" at graph 0.5,0.5 # Inserting special symbols, greek letters and italics, subscripts, superscripts: # These only look right on the final .eps file if you include the # enhanced option: set term postscript eps enhanced -- add this to the fig.gnu file # along with set output 'fig.eps', then run gnuplot fig.gnu in another window and # gv fig.eps in a third window set xlabel 'Flux, F_{/Symbol L} ' set ylabel 'Intensity, {/Times-Italic I}_o' set xlabel "N_{e} (cm^{-3})" # {/*0.75 K} is a K at three-quarters of whatever fontsize is currently in effect. # {/Symbol=20 G} is a 20-point GAMMA # For special symbols specify \char-code (in octal) # e.g., {/Symbol \245} is the symbol for infinity. # {/Symbol \305} is the Earth # {/Symbol \360} is the degree symbol # {\247} is the section symbol # There does not appear to be a sign for the Sun # These are all stored in /usr/local/gnuplot-3.7/docs/ps
For Angstroms, set encoding iso_8859_1, {\305};
then set encoding default
To get a space the size of a string type &{string}
[enhanced ps only]
If you are losing labels on multiple plots, see Multiple graphs and lines (section above).
Erase screen
clear
Grid
# this does a grid set grid
Minimum values
# set smaller values than this to zero set zero 1e-30
Default label and key for graph
# to turn off the annoying label in the upper right corner set nokey # this key has a title set key 0.018,150 title "F(x) = A tanh (x/B)" # when you plot with a 'title' this goes into the key plot "force.dat" using 1:2 title 'Column data' with points 3, \ "force.dat" using 1:3 title 'Beam data' with points 4, \ a1 * tanh( x / b1 ) title 'Column-fit: A=309, B=0.00227', \ a2 * tanh( x / b2 ) title 'Beam-fit: A=260, B=0.00415'
Title
# multiple lines to the title set title "Force Deflection Data \n and curve fit"
Setting date/time as xtics
Let's say your data file, foo.dat
, looks like this:
# Date Value 3 04-07 100 ...
You can plot the date field on the x-axis (i.e., as "xtics"), with the following set of commands:
set xdata time set timefmt "%m-%y" set format x "%m/%y" unset key set grid set ylabel "value" set xlabel "date (mm/yy)" set title "My Values Plot" plot "foo.dat" u 2:3 w l set term png set output 'foo.png' replot
- Here is another example:
# input "foo.dat" format: 2009-04 1000 set terminal svg font "Bitstream Vera Sans,12" size 600,400 set output "foo.svg" set xdata time set timefmt "%Y-%m" set xrange ["1990-01":"2009-04"] set format x "%Y" set key off unset mxtics set xtics nomirror set ytics nomirror set grid set border 3 plot "foo.dat" using 1:2 \ with line linetype rgbcolor "red" linewidth 2
Store a PostScript output file
# use the 'set output' command, the second command in the file gnuplot> set terminal postscript eps enhanced Terminal type set to 'postscript' Options are 'eps enhanced monochrome dashed defaultplex "Helvetica" 14' gnuplot> set output "file.eps" gnuplot> replot gnuplot> set output # set output back to default gnuplot> set terminal x11 # ditto for terminal type
Hardcopies: landscape plots, thicker lines, location of plots, etc.
The PostScript commands used in GnuPlot are described in /usr/local/gnuplot/docs/ps/ps_file.doc
. You can edit this file in several places easily. For example, '/gnulinewidth 5.000 def
' sets the line thicknesses, and '50 50 translate
' '0.050 0.050 scale
' set the location and scale of the plot. The PostScript commands used in gnuplot are described in:
/usr/local/gnuplot/docs/ps/ps_file.doc
You can edit this file in several places easily. For example, '/gnulinewidth 5.000 def
' sets the line thicknesses, and '50 50 translate
' '0.050 0.050 scale
' set the location and scale of the plot. The default size seems to come out better without the 'eps
', i.e., 'set terminal postscript enhanced'. Try '90 rotate
' down next to the translate commands to spin the graph 90 degrees.
Calling GnuPlot from Perl
You can call gnuplot by using a short Perl-script like the following:
#!/usr/bin/perl -w open (GP, "|/usr/bin/gnuplot -persist") or die "no gnuplot"; # force buffer to flush after each write use FileHandle; GP->autoflush(1); print GP,"set term x11;plot '/tmp/foo.dat' with lines\n"; close GP
External links
- gnuplot Central contains links to the FAQ and to download locations
- gnuplot demo plots — demo scripts for gnuplot version 4.2
- gnuplot demos — maintained by Dr. Ethan A. Merritt
- Gnuplot.py
- Gnuplot mediawiki extension
Tutorials
- Gnuplotting — Create scientific plots using Gnuplot
- Kawano: "Not so frequently asked questions" about GnuPlot (various tips).
- Visualize your data with gnuplot — IBM tutorial
- Gnuplot Tips — mouse command reference
- P. Mikulik's tutorial
- wikipedia:Gnuplot