Difference between revisions of "Dr. Elhanan Borenstein Laboratory"
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(New page: The '''Dr. Elhanan Borenstein Laboratory''' is where I have been working since August 2012. It is located in the Department of Genome Sciences at the University of Washington, Seattle, USA...) |
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* the collection and organization of metagenomic datasets and the assembly of an analysis pipeline for metagenomic data; and | * the collection and organization of metagenomic datasets and the assembly of an analysis pipeline for metagenomic data; and | ||
* the analysis of the gut microbiome of children with cystic fibrosis (CF) using computational [[gene set enrichment analysis]] (GSEA) and other methods aimed to improve identification of enriched functions. | * the analysis of the gut microbiome of children with cystic fibrosis (CF) using computational [[gene set enrichment analysis]] (GSEA) and other methods aimed to improve identification of enriched functions. | ||
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| + | ''Note: All research was done in [[Linux]] and mainly programmed in [[Python]].'' | ||
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| + | ==Keywords== | ||
| + | microbiome; metagenomics; systems biology; gene set enrichment analysis; GSEA | ||
==External links== | ==External links== | ||
Revision as of 03:40, 6 September 2012
The Dr. Elhanan Borenstein Laboratory is where I have been working since August 2012. It is located in the Department of Genome Sciences at the University of Washington, Seattle, USA.
Research
I am conducting scientific research on:
- the collection and organization of metagenomic datasets and the assembly of an analysis pipeline for metagenomic data; and
- the analysis of the gut microbiome of children with cystic fibrosis (CF) using computational gene set enrichment analysis (GSEA) and other methods aimed to improve identification of enriched functions.
Note: All research was done in Linux and mainly programmed in Python.
Keywords
microbiome; metagenomics; systems biology; gene set enrichment analysis; GSEA
