Difference between revisions of "Dr. Carlos J. Camacho Laboratory"
From Christoph's Personal Wiki
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== Research topics == | == Research topics == | ||
| − | * [ | + | * [http://en.wikipedia.org/wiki/Protein-protein_docking Protein-protein docking] (Rigid body) |
| − | * [[Molecular docking | + | * [http://en.wikipedia.org/wiki/Protein-protein_interaction_prediction Protein-protein interaction prediction] |
| − | * [ | + | * [http://en.wikipedia.org/wiki/Protein_structural_alignment Protein structural alignment] |
| − | * [ | + | * [http://en.wikipedia.org/wiki/Molecular_docking Molecular docking] |
| − | * [ | + | * [http://en.wikipedia.org/wiki/Protein-ligand_docking Protein-ligand docking] |
| − | * [ | + | * [http://en.wikipedia.org/wiki/Molecular_mechanics Molecular mechanics] |
| + | * [http://en.wikipedia.org/wiki/Search_algorithm Search algorithm] | ||
| + | * [http://en.wikipedia.org/wiki/Katchalski-Katzir_algorithm Katchalski-Katzir algorithm] | ||
* [[Daughter of Turnip|DOT]] — a molecular interaction programme | * [[Daughter of Turnip|DOT]] — a molecular interaction programme | ||
* [[Fast Fourier transform]] — used in the DOT algorithm | * [[Fast Fourier transform]] — used in the DOT algorithm | ||
| − | * [ | + | * [http://en.wikipedia.org/wiki/Convolution_theorem Convolution theorem] |
| − | * [ | + | * [http://en.wikipedia.org/wiki/Van_der_Waals_radius Van der Waals radius] |
* [[MPI]] / MPICH — for parallel computing | * [[MPI]] / MPICH — for parallel computing | ||
Revision as of 03:33, 23 July 2006
The Dr. Carlos J. Camacho Laboratory is where I did scientific research from October 2004 - July 2005 and from March 2006 - present (in absentia).
Research topics
- Protein-protein docking (Rigid body)
- Protein-protein interaction prediction
- Protein structural alignment
- Molecular docking
- Protein-ligand docking
- Molecular mechanics
- Search algorithm
- Katchalski-Katzir algorithm
- DOT — a molecular interaction programme
- Fast Fourier transform — used in the DOT algorithm
- Convolution theorem
- Van der Waals radius
- MPI / MPICH — for parallel computing
The research I have done in the laboratory has, so far, yielded a paper published and four Web Servers.
