Difference between revisions of "Dr. Elhanan Borenstein Laboratory"

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(New page: The '''Dr. Elhanan Borenstein Laboratory''' is where I have been working since August 2012. It is located in the Department of Genome Sciences at the University of Washington, Seattle, USA...)
 
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* the collection and organization of metagenomic datasets and the assembly of an analysis pipeline for metagenomic data; and
 
* the collection and organization of metagenomic datasets and the assembly of an analysis pipeline for metagenomic data; and
 
* the analysis of the gut microbiome of children with cystic fibrosis (CF) using computational [[gene set enrichment analysis]] (GSEA) and other methods aimed to improve identification of enriched functions.
 
* the analysis of the gut microbiome of children with cystic fibrosis (CF) using computational [[gene set enrichment analysis]] (GSEA) and other methods aimed to improve identification of enriched functions.
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''Note: All research was done in [[Linux]] and mainly programmed in [[Python]].''
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==Keywords==
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microbiome; metagenomics; systems biology; gene set enrichment analysis; GSEA
  
 
==External links==
 
==External links==

Revision as of 03:40, 6 September 2012

The Dr. Elhanan Borenstein Laboratory is where I have been working since August 2012. It is located in the Department of Genome Sciences at the University of Washington, Seattle, USA.

Research

I am conducting scientific research on:

  • the collection and organization of metagenomic datasets and the assembly of an analysis pipeline for metagenomic data; and
  • the analysis of the gut microbiome of children with cystic fibrosis (CF) using computational gene set enrichment analysis (GSEA) and other methods aimed to improve identification of enriched functions.

Note: All research was done in Linux and mainly programmed in Python.

Keywords

microbiome; metagenomics; systems biology; gene set enrichment analysis; GSEA

External links