GenomeDiagram

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GenomeDiagram is a python package for the visualization of large-scale genomic data.

ABSTRACT: We present GenomeDiagram, a flexible, open-source Python module for the visualization of large-scale genomic, comparative genomic and other data with reference to a single chromosome or other biological sequence. GenomeDiagram may be used to generate publication-quality vector graphics, rastered images and in-line streamed graphics for webpages.[1]

It requires Python 2.3 or higher, and recent versions of the ReportLab and BioPython packages. GenomeDiagram has been merged in BioPython.

See also

References

  1. Pritchard L, White JA, Birch PRJ, Toth IK (2006). "GenomeDiagram: a python package for the visualization of large-scale genomic data". Bioinformatics, 22(5):616-617; DOI:10.1093/bioinformatics/btk021

External links