Difference between revisions of "Technical and Specialized Skills"

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*[[Image:100per.png]] Primary OS: [[Linux]] (32-bit/64-bit; distros: [[CentOS]] {favourite}, [[SuSE]], [[Mandriva Linux|Mandriva]], Slackware, and Ubuntu)
 
*[[Image:100per.png]] Primary OS: [[Linux]] (32-bit/64-bit; distros: [[CentOS]] {favourite}, [[SuSE]], [[Mandriva Linux|Mandriva]], Slackware, and Ubuntu)
 
*[[Image:25per.png]] [[Gentoo]] (still learning but ''loving'' this distro!)
 
*[[Image:25per.png]] [[Gentoo]] (still learning but ''loving'' this distro!)
 +
*[[Image:50per.png]] CoreOS
 
*[[Image:50per.png]] Unix (used this during my time in [[:Category:Academia|academia]])
 
*[[Image:50per.png]] Unix (used this during my time in [[:Category:Academia|academia]])
 
*[[Image:50per.png]] Mac OS
 
*[[Image:50per.png]] Mac OS
  
 
==Cloud computing and virtual environments==
 
==Cloud computing and virtual environments==
 +
* [[:Category:AWS|Amazon Web Services]] (AWS)
 +
* [[Google Cloud Platform]] (GCP)
 +
* [[Kubernetes]] (+Anthos)
 +
* [[Docker]]
 +
* [[Rancher]]
 +
* [[Ansible]]
 +
* [[Terraform]]
 +
* KVM
 
* [[:Category:XenServer|XenServer]]
 
* [[:Category:XenServer|XenServer]]
 
* [[:Category:OpenStack|OpenStack]]
 
* [[:Category:OpenStack|OpenStack]]
 +
* [[:Category:Qstack|Qstack]]
 
* [https://www.chef.io/ Chef]
 
* [https://www.chef.io/ Chef]
 
* [https://www.vagrantup.com/ Vagrant]
 
* [https://www.vagrantup.com/ Vagrant]
 +
* [[Packer]]
 +
* [https://sensuapp.org/ Sensu]
 +
* [https://www.nagios.org/ Nagios]
 
* [[:Category:Rackspace|Rackspace]]
 
* [[:Category:Rackspace|Rackspace]]
 +
* [[:Category:DigitalOcean|DigitalOcean]]
 +
* [[RabbitMQ]]
 +
* [https://www.go.cd/ GoCD]
  
 
==Computer languages, scripting, etc==
 
==Computer languages, scripting, etc==
 
*[[Image:100per.png]] [[Python]] (+[http://pandas.pydata.org/ Pandas]) — 2006-present
 
*[[Image:100per.png]] [[Python]] (+[http://pandas.pydata.org/ Pandas]) — 2006-present
 
*[[Image:100per.png]] Perl (+CGI) — 1999-present
 
*[[Image:100per.png]] Perl (+CGI) — 1999-present
*[[Image:75per.png]] [[C programming language|C]] (+MPI/[[MPICH]]) — 2000-present
+
*[[Image:75per.png]] [[C programming language|C]] (+MPI/[[MPICH]]) — 2000-2012
*[[Image:50per.png]] ''Fortran 77'' — 2004-present
+
*[[Image:50per.png]] ''Fortran 77'' — 2004-2010
 
*[[Image:100per.png]] [[MySQL]] — 2002-present
 
*[[Image:100per.png]] [[MySQL]] — 2002-present
  
 
===Web Oriented===
 
===Web Oriented===
 
*[[Image:100per.png]] [[PHP]] (+PEAR, Smarty)
 
*[[Image:100per.png]] [[PHP]] (+PEAR, Smarty)
*[[Image:100per.png]] RESTful APIs (especially via [[cURL]] and/or Python's [https://docs.python.org/2/library/urllib.html urllib] module; see [[:Category:Rackspace|this article]] for lots of examples)
+
*[[Image:100per.png]] RESTful APIs (especially via [[curl|cURL]] and/or Python's [https://docs.python.org/2/library/urllib.html urllib] module; see [[:Category:Rackspace|this article]] for lots of examples)
 
*[[Image:100per.png]] [[Cascading Style Sheets]] (CSS; I use [http://getbootstrap.com/ Bootstrap] for all of my projects)
 
*[[Image:100per.png]] [[Cascading Style Sheets]] (CSS; I use [http://getbootstrap.com/ Bootstrap] for all of my projects)
 
*[[Image:100per.png]] HTML/XHTML
 
*[[Image:100per.png]] HTML/XHTML
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===Shell scripting languages and techniques===
 
===Shell scripting languages and techniques===
 
   see: [[:Category:Linux Command Line Tools]] and [[:Category:Scripting languages]] for detailed listing.
 
   see: [[:Category:Linux Command Line Tools]] and [[:Category:Scripting languages]] for detailed listing.
*[[Image:75per.png]] [[Awk|awk / gawk]]
+
*[[Image:100per.png]] [[Awk|awk / gawk]]
 
*[[Image:100per.png]] [[sed]]
 
*[[Image:100per.png]] [[sed]]
 
*[[Image:100per.png]] [[Bash]]
 
*[[Image:100per.png]] [[Bash]]
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*[[Image:75per.png]] [[R programming language|R (programming language)]]
 
*[[Image:75per.png]] [[R programming language|R (programming language)]]
 
*[[Image:50per.png]] [[TeX]] / [[LaTeX]]
 
*[[Image:50per.png]] [[TeX]] / [[LaTeX]]
 +
* ImageMagick
  
==Linux System Administration, Networking, and Security==
+
==Linux Systems Administration, Networking, and Security==
 
''Note: Everything listed here is Linux-related.''
 
''Note: Everything listed here is Linux-related.''
* Remote login, file transfer, etc.: [[Secure Shell|SSH]] (+scp) / [[Rsync (command)|rsync]] / FTP, [[dsh]] ([https://www.netfort.gr.jp/~dancer/software/dsh.html Distributed Shell])
+
* Remote login, file transfer, etc.: [[Secure Shell|SSH]] (+scp), [[Rsync (command)|rsync]], FTP, [[dsh]] ([https://www.netfort.gr.jp/~dancer/software/dsh.html Distributed Shell]), sshpass, [[GNU parallel]]
 
* Firewall: [[iptables]] (via the CLI and, e.g., [http://www.gibraltar.at/ Gibralter])
 
* Firewall: [[iptables]] (via the CLI and, e.g., [http://www.gibraltar.at/ Gibralter])
* [[:Category:Linux troubleshooting|Troubleshooting]] toolbox: iostat, [[sysstat]], [[tcpdump]], [[ethtool]], ps, dmesg, top, free, dmidecode, mtr, bwm-ng, ping, dig, traceroute, /proc files, /var/log files, [[curl]], [[strace]], [[find]], lsof, lspci, modprobe/lsmod, [[netstat]], grep, etc.
+
* [[:Category:Linux troubleshooting|Troubleshooting]] toolbox: iostat, [[sysstat]], [[tcpdump]], [[ethtool]], [[netcat]] / nc, telnet, ps, dmesg, top / htop, free, dmidecode, mtr, bwm-ng, ping / fping, dig, traceroute, /proc files, /var/log files, [[curl]], wget, [[strace]], [[find]], lsof, [[lspci]], modprobe/lsmod, [[netstat]], grep, etc.
 
* [[crontab]]
 
* [[crontab]]
 
* Network filesystems: NFS, NTFS, NAS, [[Samba]], etc.
 
* Network filesystems: NFS, NTFS, NAS, [[Samba]], etc.
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==Databases==
 
==Databases==
* [[MySQL]] / MariaDB
+
* [[MySQL]] / MariaDB / Percona
 
* SQLite
 
* SQLite
  
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* Previous developer / programmer / maintainer of: [[Pymmlib]], [[TLSMD]], [[Raster3D]]
 
* Previous developer / programmer / maintainer of: [[Pymmlib]], [[TLSMD]], [[Raster3D]]
 
* [https://www.wireshark.org/ Wireshark]
 
* [https://www.wireshark.org/ Wireshark]
 +
* [[ImageMagick]]
 
* [[BLAST]] (standalone and webserver)
 
* [[BLAST]] (standalone and webserver)
 
* [[Clustal]]
 
* [[Clustal]]
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* [[GIMP]] (+various image generating techniques)
 
* [[GIMP]] (+various image generating techniques)
 
* OpenOffice / LibreOffice
 
* OpenOffice / LibreOffice
* [[vi]] (used for pretty much everything I do)
+
* [[vi|vi/vim]] (used for pretty much everything I do)
 
* Etc, etc. (Linux has been my primary OS for work and home use since 1999)
 
* Etc, etc. (Linux has been my primary OS for work and home use since 1999)
  
 
[[Category:Technical and Specialized Skills| Technical and Specialized Skills]]
 
[[Category:Technical and Specialized Skills| Technical and Specialized Skills]]

Latest revision as of 11:35, 5 February 2020

This article will present a list of the technical and specialized skills I have as wells as links to articles I have written on each of them. I have been actively and professionally involved with the majority of the following since May 2000 (see: Curriculum Vitae for details).

  • Legend:
    25per.png = beginner
    50per.png = basic
    75per.png = intermediate
    100per.png = advanced

Computer operating systems

  • 100per.png Primary OS: Linux (32-bit/64-bit; distros: CentOS {favourite}, SuSE, Mandriva, Slackware, and Ubuntu)
  • 25per.png Gentoo (still learning but loving this distro!)
  • 50per.png CoreOS
  • 50per.png Unix (used this during my time in academia)
  • 50per.png Mac OS

Cloud computing and virtual environments

Computer languages, scripting, etc

  • 100per.png Python (+Pandas) — 2006-present
  • 100per.png Perl (+CGI) — 1999-present
  • 75per.png C (+MPI/MPICH) — 2000-2012
  • 50per.png Fortran 77 — 2004-2010
  • 100per.png MySQL — 2002-present

Web Oriented

Shell scripting languages and techniques

 see: Category:Linux Command Line Tools and Category:Scripting languages for detailed listing.

Graphical scripts

Linux Systems Administration, Networking, and Security

Note: Everything listed here is Linux-related.

Databases

  • MySQL / MariaDB / Percona
  • SQLite

Web Applications

Note: The following is an incomplete list.

Software (*nix)

 see: Category:Bioinformatics and Category:Crystallography for more.