Difference between revisions of "Dr. David W. Ussery Laboratory"

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== Results ==
 
== Results ==
The research I did in this laboratory yielded a [http://wiki.christophchamp.com/index.php/Curriculum_Vitae#Publications paper published] and a Web Server:
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The research I did in this laboratory yielded a [[Curriculum_Vitae#Publications|paper published]]<ref name=Champ2006>'''P. Christoph Champ''', Tim T. Binnewies, N. Nielsen, Guy Zinman, Kristoffer Kiil, Hang Wu, Jon Bohlin, and David W. Ussery (2006). Genome update: purine strand bias in 280 bacterial chromosomes. [http://mic.sgmjournals.org/future/152.3.shtml ''Microbiology'', '''152(3)''':579-583]. [[http://www.hubmed.org/display.cgi?uids=16514138 HubMed]]</ref> and a Web Server:
 
* '''[http://www.cbs.dtu.dk/services/FD/ CBS Fungal Database]''': DNA structural atlases for complete chromosomes and genomes.
 
* '''[http://www.cbs.dtu.dk/services/FD/ CBS Fungal Database]''': DNA structural atlases for complete chromosomes and genomes.
 
:: Programmer, Server architect, and administrator; November 2005-December 2005.
 
:: Programmer, Server architect, and administrator; November 2005-December 2005.
  
 
== References ==
 
== References ==
* '''P. Christoph Champ''', Tim T. Binnewies, N. Nielsen, Guy Zinman, Kristoffer Kiil, Hang Wu, Jon Bohlin and David W. Ussery (2006). Genome update: purine strand bias in 280 bacterial chromosomes. [http://mic.sgmjournals.org/future/152.3.shtml ''Microbiology'', '''152(3)''':579-583]. [[http://www.hubmed.org/display.cgi?uids=16514138 HubMed]]
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<references/>
 
=== Further reading ===
 
=== Further reading ===
* Kellis M, Patterson N, Endrizzi M, Birren B, Lander E (2003). Sequencing and Comparison of yeast species to identify genes and regulatory motifs. ''Nature'', pp. 241-254.
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* Kellis M, Patterson N, Endrizzi M, Birren B, Lander E (2003). Sequencing and Comparison of yeast species to identify genes and regulatory motifs. ''Nature, pp. 241-254''.
* Cliften P, Sudarsanam P, Desikan A (2003). Finding functional features in Saccharomyces genomes by phylogenetic footprinting. ''Science'', pp. 71-76.
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* Cliften P, Sudarsanam P, Desikan A (2003). Finding functional features in Saccharomyces genomes by phylogenetic footprinting. ''Science, pp. 71-76''.
* Bofffeli D, McAuliffe J, Ovcharenko D, Lewis KD, Ovcharenko I, Pachter L, Rubin EM (2003). Phylogenetic shadowing of primate sequences to find functional regions of the human genome, ''Science'', '''299(5611)''':1391-1394.
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* Bofffeli D, McAuliffe J, Ovcharenko D, Lewis KD, Ovcharenko I, Pachter L, Rubin EM (2003). Phylogenetic shadowing of primate sequences to find functional regions of the human genome, ''Science, 299(5611):1391-1394''.
* Dujon B, ''et al.'' (2004). Genome evolution in yeasts. ''Nature'', '''430''':35-44.
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* Dujon B, ''et al.'' (2004). Genome evolution in yeasts. ''Nature, 430:35-44''.
* Filipski A, Kumar S (2005). Comparative genomics in eukaryotes. ''The Evolution of the Genome (ed. T.R. Gregory), pp. 521-583. Elsevier, San Diego.
+
* Filipski A, Kumar S (2005). Comparative genomics in eukaryotes. ''The Evolution of the Genome (ed. T.R. Gregory), pp. 521-583. Elsevier, San Diego''.
* Gregory TR, DeSalle R (2005). Comparative genomics in prokaryotes. ''The Evolution of the Genome'' (ed. T.R. Gregory), pp. 585-675. Elsevier, San Diego.
+
* Gregory TR, DeSalle R (2005). Comparative genomics in prokaryotes. ''The Evolution of the Genome (ed. T.R. Gregory), pp. 585-675. Elsevier, San Diego''.
* Hardison RC. Comparative genomics. ''PLoS biology'', '''1(2)''':e58.
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* Hardison RC. Comparative genomics. ''PLoS biology, 1(2):e58''.
  
 
[[Category:Academic Research]]
 
[[Category:Academic Research]]

Revision as of 19:19, 16 September 2006

The Dr. David W. Ussery Laboratory is where I did scientific research from August 2005 - November 2005.

Research topics

Results

The research I did in this laboratory yielded a paper published[1] and a Web Server:

Programmer, Server architect, and administrator; November 2005-December 2005.

References

  1. P. Christoph Champ, Tim T. Binnewies, N. Nielsen, Guy Zinman, Kristoffer Kiil, Hang Wu, Jon Bohlin, and David W. Ussery (2006). Genome update: purine strand bias in 280 bacterial chromosomes. Microbiology, 152(3):579-583. [HubMed]

Further reading

  • Kellis M, Patterson N, Endrizzi M, Birren B, Lander E (2003). Sequencing and Comparison of yeast species to identify genes and regulatory motifs. Nature, pp. 241-254.
  • Cliften P, Sudarsanam P, Desikan A (2003). Finding functional features in Saccharomyces genomes by phylogenetic footprinting. Science, pp. 71-76.
  • Bofffeli D, McAuliffe J, Ovcharenko D, Lewis KD, Ovcharenko I, Pachter L, Rubin EM (2003). Phylogenetic shadowing of primate sequences to find functional regions of the human genome, Science, 299(5611):1391-1394.
  • Dujon B, et al. (2004). Genome evolution in yeasts. Nature, 430:35-44.
  • Filipski A, Kumar S (2005). Comparative genomics in eukaryotes. The Evolution of the Genome (ed. T.R. Gregory), pp. 521-583. Elsevier, San Diego.
  • Gregory TR, DeSalle R (2005). Comparative genomics in prokaryotes. The Evolution of the Genome (ed. T.R. Gregory), pp. 585-675. Elsevier, San Diego.
  • Hardison RC. Comparative genomics. PLoS biology, 1(2):e58.