Difference between revisions of "Genome projects"
From Christoph's Personal Wiki
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*[http://www.genomics.ceh.ac.uk/plasmiddb/plasmidview.html Plasmid Genome Database] (PGD) | *[http://www.genomics.ceh.ac.uk/plasmiddb/plasmidview.html Plasmid Genome Database] (PGD) | ||
*[http://www.ncbi.nlm.nih.gov/genomes/static/o.html NCBI - All plasmids] | *[http://www.ncbi.nlm.nih.gov/genomes/static/o.html NCBI - All plasmids] | ||
| + | *[http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj NCBI Entrez Genome Project Database] | ||
| + | *[http://www.genomesonline.org/ Genomes OnLine Database (GOLD)] | ||
| − | ==List of | + | ==List of genome project websites== |
*[http://www.fishbase.org/search.php FishBase] | *[http://www.fishbase.org/search.php FishBase] | ||
*[http://www.flybase.org/ FlyBase] | *[http://www.flybase.org/ FlyBase] | ||
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*[http://rgd.mcw.edu/ Rat Genome Database] | *[http://rgd.mcw.edu/ Rat Genome Database] | ||
*[http://paramecium.cgm.cnrs-gif.fr/db/index ''Paramecium'' DB] | *[http://paramecium.cgm.cnrs-gif.fr/db/index ''Paramecium'' DB] | ||
| + | *[http://www.bradygenome.org/ ''Bradyrhizobium japonicum'' USDA 110] ([http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=Retrieve&dopt=Overview&list_uids=17 NCBI]) | ||
*[http://psychro.bioinformatics.unsw.edu.au/ Extremophiles] | *[http://psychro.bioinformatics.unsw.edu.au/ Extremophiles] | ||
*[http://www.hapmap.org/ Human HapMap] | *[http://www.hapmap.org/ Human HapMap] | ||
Revision as of 03:23, 4 July 2007
List overviews
- NCBI - All Genomes
- Plasmid Genome Database (PGD)
- NCBI - All plasmids
- NCBI Entrez Genome Project Database
- Genomes OnLine Database (GOLD)
List of genome project websites
- FishBase
- FlyBase
- wFleaBase
- WormBase — C. elegans genome, C. briggsae genome, etc.
- BeeBase — the Apis mellifera genome.
- Gramene
- Arabidopsis
- SGD — Yeast genome
- Mouse Genome Informatics (MGI)
- The Rat Genome Database (RGD)
- dictyBase — resource for the biology and genomics of the social amoeba Dictyostelium discoideum.
- EcoliHub / The E. coli Wiki
- Nescent.org
- BioCyc — a collection of 260 Pathway/Genome Databases
- Human Genome Segmental Duplication Database
- Saccharomyces Genome Database
- Dictybase
- Fungal Genome Database
- Mouse Genome Informatics
- Rat Genome Database
- Paramecium DB
- Bradyrhizobium japonicum USDA 110 (NCBI)
- Extremophiles
- Human HapMap
- OryGenesDB
- Pseudomonas
- Tribolium (Beetle)
- Tetrahymena
- Marine Biological Lab projects including Giardia, Trypanosome brucei, and many others
- Solonaceae Genome Network
- Maize Genome Database (MIPS)
- Maize Genome Assembly
- Toxoplasma
- Cryptosporidium
- GeneDB at WT Sanger Institute including S. pombe
- Marine Roseobacters
- Rice-Magnaporthe interaction database
- Candida Genome Database
- GrainGenes: Triticeae and Avena
- Type I Diabetes
- Biohealthbase
- Aniseed Genome Browser
Databases
- http://ecoliwiki.net/colipedia/index.php/Category:Databases
- African Mammals Databank
- TreeBASE — a relational database of phylogenetic information
- PROSITE — database of protein domains, families, and functional sites
- PRINTS
- ALIGN
