Difference between revisions of "Genome projects"

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*[http://www.biocyc.org/ BioCyc] — a collection of 260 Pathway/Genome Databases
 
*[http://www.biocyc.org/ BioCyc] — a collection of 260 Pathway/Genome Databases
 
*[http://www.genedb.org GeneDB] at [http://www.sanger.ac.uk WT Sanger Institute] including [http://www.genedb.org/genedb/pombe/ ''S. pombe'']
 
*[http://www.genedb.org GeneDB] at [http://www.sanger.ac.uk WT Sanger Institute] including [http://www.genedb.org/genedb/pombe/ ''S. pombe'']
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===Personal Genomes sequenced by date===
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see: [http://personalgenomics.org/index.php/Main_Page PersonalGenomics.org]
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* Craig Venter: 2007-09-04
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* James Watson: 2008-04-09
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* Yang Huanming: 2008-10-17
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* Seong-Jin Kim: 2008-12-04
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* Misha Angrist: 2009-03-31
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* Rosalynn Gill: 2009-03-31
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* Jay Flatley: 2009-05-20
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* Henry Louis "Skip" Gates Jr.: 2009-08-10
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* Hermann Hauser: 2009-08-20
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* Henry Louis Gates Sr.: 2009-08-21
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* George Church: 2009-11-05
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* Glenn Close: 2009-11-20
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* John West: 2010-01-25
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* Judy West: 2010-01-25
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* Anne West: 2010-01-25
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* Paul West: 2010-01-25
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* Desmond Tutu: 2010-02-17
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* James Lupski: 2010-03-10
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* Rosalyn Gill: 2010-04-20
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* Stephen Quake: 2010-04-30
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* Greg Lucier: 2010-05-01
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===Mammals===
 
===Mammals===
*[http://genome.ucsc.edu/ENCODE/ UCSC Human Genome] — release: '''hg18''' (2006-03)  
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*[http://genome.ucsc.edu/ENCODE/ UCSC Human Genome] &mdash; release: '''hg19'''; GRCh37 genebuild (March 2009)<!-- '''hg18''' (2006-03)--->
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*:NCBI reference Build 37, which consists of the assembled nuclear chromosome from GRCh37 plus the Cambridge Reference Sequence for the mitochondrion (NC_012920.1). This assembly is also known as UCSC hg19 (though with an alternate mitochondrial sequence).
 
*[ftp://ftp.ncbi.nih.gov/pub/TraceDB/Personal_Genomics/ James Watson's genome] &mdash; on TraceDB/Personal Genomics (NCBI)
 
*[ftp://ftp.ncbi.nih.gov/pub/TraceDB/Personal_Genomics/ James Watson's genome] &mdash; on TraceDB/Personal Genomics (NCBI)
 
*[http://www.hapmap.org/ Human HapMap]
 
*[http://www.hapmap.org/ Human HapMap]
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*[http://www.informatics.jax.org/ Mouse Genome Informatics (MGI)] &mdash; release: '''MGI 3.54''' (2008-01-19); mm3 (2003-02)
 
*[http://www.informatics.jax.org/ Mouse Genome Informatics (MGI)] &mdash; release: '''MGI 3.54''' (2008-01-19); mm3 (2003-02)
 
*[http://rgd.mcw.edu/ Rat Genome Database (RGD)] &mdash; release: '''RGD 3.4'''; rn3 (2003-06)
 
*[http://rgd.mcw.edu/ Rat Genome Database (RGD)] &mdash; release: '''RGD 3.4'''; rn3 (2003-06)
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===Other===
 
===Other===
 
*[http://www.fishbase.org/search.php FishBase]
 
*[http://www.fishbase.org/search.php FishBase]

Latest revision as of 20:08, 7 August 2012

Statistics

Total genomes sequenced, as of 27-Jul-2012:

  • Eukaryotes: 2,017
  • Prokaryotes: 13,054
  • Viruses: 3,155
see: directory for a daily updated list of completed microbial genomes.

List overviews

List of genome project websites

Personal Genomes sequenced by date

see: PersonalGenomics.org
  • Craig Venter: 2007-09-04
  • James Watson: 2008-04-09
  • Yang Huanming: 2008-10-17
  • Seong-Jin Kim: 2008-12-04
  • Misha Angrist: 2009-03-31
  • Rosalynn Gill: 2009-03-31
  • Jay Flatley: 2009-05-20
  • Henry Louis "Skip" Gates Jr.: 2009-08-10
  • Hermann Hauser: 2009-08-20
  • Henry Louis Gates Sr.: 2009-08-21
  • George Church: 2009-11-05
  • Glenn Close: 2009-11-20
  • John West: 2010-01-25
  • Judy West: 2010-01-25
  • Anne West: 2010-01-25
  • Paul West: 2010-01-25
  • Desmond Tutu: 2010-02-17
  • James Lupski: 2010-03-10
  • Rosalyn Gill: 2010-04-20
  • Stephen Quake: 2010-04-30
  • Greg Lucier: 2010-05-01

Mammals

Other

Viruses

Related

Databases

Other