From Christoph's Personal Wiki
see: MUSCLE User Guide for details.
muscle -in seqs.fa -out seqs.afa
- wikipedia:Sequence alignment software
- MAFFT — Multiple alignment program for amino acid or nucleotide sequences
- Edgar RC (2004). "MUSCLE: multiple sequence alignment with high accuracy and high throughput". Nucleic Acids Research, 32(5):1792-97.
- Edgar RC (2004). "MUSCLE: a multiple sequence alignment method with reduced time and space complexity". BMC Bioinformatics, 5(1):113.