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• Netpbm program directory
  ;jpegtopnm : convert JFIF/JPEG/EXIF file to Netpbm format ;bmptopnm : convert Windows or OS/2 Bitmap file to PPM or PGM
  17 KB (2,636 words) - 06:49, 1 September 2006
• LAMP on Mandriva
  ...that you do '''not''' set your MySQL root password to be the same as your system root password!''). ...de> file has been removed, this is now set in the <code>/etc/my.cnf</code> file.
  7 KB (1,074 words) - 01:52, 3 May 2007
• Expect (command)
  # Exit the telnet session, and wait for a special end-of-file character. # Exit the ftp session, and wait for a special end-of-file character.
  7 KB (1,064 words) - 03:05, 13 April 2008
• Secure Shell
  * Step 3: Set directory/file permissions (if not already set): ...r remote server without entering a password. This is useful for automating file transfers. However, it ''must'' be used with care. If not executed properly
  10 KB (1,480 words) - 18:24, 6 February 2024
• Urpmi
  urpmf <file> # Find package that contains a file urpmi --auto-select # Update your system
  3 KB (499 words) - 05:50, 17 July 2009
• Linux directory structure
  ...system as they depend on whether certain subsystems, such as the X Window System, are installed. |Essential [[device file|'''dev'''ices]] (e.g., [[:/dev/null]])
  7 KB (974 words) - 20:12, 19 April 2022
• Shell colour codes
  ...de>.dir_colors</code> in your <code>$HOME</code> directory to override the system defaults. Below are the colour init strings for the basic file types. A colour init string consists of one or more of the following numeri
  1 KB (236 words) - 02:08, 9 October 2006
• Make
  ...make all the files and other tools involved in generating the final output file (or files). ...nk]] file and would only want the [[fasta]] sequence of the genome. If the file is named "foo.gbk", then one could use gmake to get the fasta sequence: exe
  6 KB (1,015 words) - 03:38, 1 October 2009
• TAB file format
  A '''tab file''' is file format proposed by Rasmus Wernersson for annotating biological sequences.<r ...st/bioperl/Bio/SeqIO/tab.pm Bio::SeqIO::tab]). It is a nearly raw sequence file input/output stream.
  11 KB (1,628 words) - 01:05, 13 July 2012
• PostScript
  ;pstops : shuffle pages in a PostScript file (see manpage for details) ...t.html ''First Guide to PostScript''] is an introduction to the PostScript system.
  3 KB (469 words) - 01:21, 8 February 2009
• Rdate
  ...and time from a host or hosts on the network and optionally set the local system time. ; -s : Set the local system time from the host; must be specified by root.
  783 bytes (126 words) - 02:08, 26 April 2007
• Findutils
  ...n with other programs to provide modular and powerful directory search and file locating capabilities to other commands. * <tt>updatedb</tt> - update a file name database
  10 KB (1,695 words) - 23:28, 21 May 2015
• Bioinformatics resource list
  ; R : A statistical computation and graphics system. (''License: GNU'') ; openbabel : A free, open-source version of the Babel chemistry file translation program. (''License: GPL'')
  13 KB (1,598 words) - 06:08, 20 May 2008
• Mt
  $ tar --index-file=foo.log -jcvf /dev/nst0 /data /home * Or, list files to exclude in a file (one filename per line):
  6 KB (1,008 words) - 08:58, 17 February 2016
• ISO Images
  This results in a file called <code>cd.iso</code> in folder <code>/tmp</code> which contains all t ...s-NT or Windows-95 machines). The <code>-r</code> is for the directory and file permissions, user/group IDs, etc.
  11 KB (1,842 words) - 14:44, 14 July 2014
• Ptx
  ...x Command Line Tools|command-line]] utility to produce a permuted index of file contents similar to a '''[[KWIC]]''' (keywords in their context). It is par -G, --traditional behave more like System V `ptx'
  15 KB (2,341 words) - 02:00, 26 April 2007
• Dbacl
  Suppose a file document.txt contains English text lines interspersed with noise lines. To ...and filled with appropriate sample emails. A [[Crontab (command)|crontab]] file can be used to learn the three categories once a day, e.g.
  7 KB (1,190 words) - 08:53, 22 February 2007
• Dd (command)
  ; '''if'''=''file'' : Input File: Read from ''file'' instead from [[Redirection (Linux)|standard input]]. ; '''of'''=''file'' : Output File: Write to ''file'' instead to standard output. See also the keyword '''notrunc'''.
  10 KB (1,656 words) - 01:46, 7 May 2018
• Shred
  ...o hide its contents, and optionally delete it. It overwrites the specified FILE(s) repeatedly, in order to make it harder for even very expensive hardware * <tt>shred [OPTIONS] FILE [...]</tt>
  4 KB (623 words) - 02:39, 13 February 2007
• Linux HDD
  ...machine, you must add the appropriate line to your <code>/etc/fstab</code> file. Something ''like'' the following should work for most uses: Then mount it using the information in your <code>/etc/fstab</code> file:
  7 KB (1,275 words) - 03:45, 1 December 2015

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