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  • Perl and Unix for Bioinformatics (academic course)
    ...udent should be able to solve minor bioinformatics problem using Perl in a Unix environment, for example during project work Elementary Unix with most common commando line file handling and input/output redirection.
    1 KB (142 words) - 23:34, 25 May 2006
  • Common Unix Printing System
    ...mmon Unix Printing System''' ('''CUPS''') is a modular printing system for Unix-like computer operating systems that allows a computer to act as a powerful *[[wikipedia:Common Unix Printing System]]
    6 KB (795 words) - 22:59, 23 January 2008
  • Unix sockets
    4 KB (652 words) - 22:26, 20 January 2022

Page text matches

  • Technical and Specialized Skills
    *[[Image:50per.png]] Unix (used this during my time in [[:Category:Academia|academia]])
    6 KB (773 words) - 11:35, 5 February 2020
  • Bash
    ...'ell''—a pun on the Bourne shell (sh), which was an early, important Unix shell. Bash cannot perform in-process [[floating point]] calculations. The only Unix command shells capable of this are [[Korn Shell]] (1993 version) and [[zsh]
    34 KB (5,354 words) - 19:04, 9 May 2023
  • Shebang
    ...file (commonly called a [[:Category:Scripting languages|script]]) causing Unix-like operating systems to execute the commands in the text file using a spe ...SH bang'', referring to the two typical Unix names of the two characters. (Unix jargon uses ''sharp'' or ''hash'' to refer to the number sign character and
    5 KB (755 words) - 23:20, 25 May 2006
  • Curriculum Vitae
    ...Mandriva]], RedHat/Fedora, Slackware, and Ubuntu); Secondary OS: macOS and Unix. Note: I do ''not'' work in or have any experience in a Microsoft Windows e * '''Software (Unix/Linux)''':
    39 KB (5,009 words) - 19:43, 14 January 2023
  • Vi
    $ vim +'set ff=unix' +wq file.txt set ffs=unix
    14 KB (2,396 words) - 22:38, 21 June 2023
  • DNA Microarray Analysis (academic course)
    * [http://www.cbs.dtu.dk/phdcourse/unixguide.html Beginner's Guide to UNIX] is available on-line. :: Introduction to UNIX and [[R programming language|R]] ([http://www.cbs.dtu.dk/dtucourse/cookbook
    10 KB (1,304 words) - 00:18, 9 August 2006
  • Perl and Unix for Bioinformatics (academic course)
    ...udent should be able to solve minor bioinformatics problem using Perl in a Unix environment, for example during project work Elementary Unix with most common commando line file handling and input/output redirection.
    1 KB (142 words) - 23:34, 25 May 2006
  • NJplot
    ...1.fr/software/njplot.html for MAC, PC (under Windows95/NT/XP), and several Unix/[[Linux]] platforms.
    4 KB (587 words) - 02:42, 13 July 2012
  • Clustal
    ...ion has a graphical user interface. It is availabe for Windows, Mac OS and Unix/Linux ...stalw2/ European Bioinformatics Institute ftp server]. Choose ''unix'' for Unix/Linux, ''mac'' for Mac OS, or ''dos'' for Windows.
    4 KB (596 words) - 02:18, 13 July 2012
  • ClustalW
    '''ClustalW''' is multiple alignment programme for Unix and Linux (I am ignoring other operating systems in this article/tutorial). ...This will happen randomly i.e. even if none of the pairs of sequences are less than 7% identical, the bootstrap samples may contain pairs of sequences tha
    16 KB (2,365 words) - 20:40, 6 November 2008
  • ClustalX
    ...e version of [[Clustal]]. It is available for free for Windows, Mac OS and Unix/[[Linux]]. # If your sequences are less than ~95% identical, you should choose to correct your distance measures fo
    2 KB (333 words) - 08:45, 29 December 2006
  • Linux
    *[http://www.faqs.org/docs/artu/ The Art of Unix Programming] — by Eric Steven Raymond
    7 KB (1,028 words) - 20:06, 24 October 2014
  • Blastall
    To run the first search enter the following command from the UNIX command line in your BLAST directory:
    8 KB (1,298 words) - 00:45, 17 August 2007
  • Agrep
    With no FILE, or when FILE is -, reads standard input. If less than two FILEs are given, -h is assumed. Exit status is 0 if a match is fou ...action of the pattern length (will be replaced by the smallest integer not less than the corresponding fraction), or a list with possible components
    13 KB (1,944 words) - 06:33, 20 April 2012
  • Sed
    ...data processing to be done by shell scripts. Sed was probably the earliest Unix tool that really encouraged regular expressions to be used ubiquitously. In ...plying the sed program). In-place editing is often used instead of <tt>ed (UNIX)</tt> scripts: for example,
    11 KB (1,730 words) - 00:56, 18 May 2015
  • Miscellaneous commands
    ...arr.com/topic/115/linux-unix-cheat-sheets---the-ultimate-collection/ Linux-Unix cheat sheets - The ultimate collection] *[http://cb.vu/unixtoolbox.xhtml Unix Toolbox]
    20 KB (3,106 words) - 23:38, 10 September 2021
  • Regular expression
    ...or [[Sed|sed]] and the filter [[Grep (command)|grep]]) provided by [[Linux|Unix]] distributions were the first to popularize the concept of regular express
    13 KB (2,034 words) - 21:46, 9 March 2009
  • Sed/scripts
    * IN UNIX ENVIRONMENT: convert DOS newlines (CR/LF) to Unix format. * IN UNIX ENVIRONMENT: convert Unix newlines (LF) to DOS format.
    30 KB (4,929 words) - 22:47, 21 August 2019
  • Coreutils
    ...h as [[cat ((command))|cat]], [[ls]], and [[rm ((command))|rm]] needed for Unix-like operating systems.
    9 KB (1,324 words) - 23:35, 6 February 2013
  • Redirection (Linux)
    In Unix-like systems, there are two output paths that, if left unmodified, will sen find / -name .profile 2>&1 | less
    12 KB (1,905 words) - 20:29, 22 September 2020
  • Curl/manual
    5 seconds of a transfer is based on less time of course.) ...curity risk if someone else gets hold of your passwords, so therefore most unix programs won't read this file unless it is only readable by yourself (curl
    29 KB (4,993 words) - 01:53, 26 April 2007
  • Netpbm
    ...ckage of graphics programs and a programming library, used mainly in the [[Unix]] world. The latest stable version is 10.26.25 (released 19 February 2006).
    2 KB (245 words) - 06:49, 1 September 2006
  • Netpbm program directory
    : convert PBM into Unix plot file
    17 KB (2,636 words) - 06:49, 1 September 2006
  • LAMP on Mandriva
    # All interaction with mysqld must be made via Unix sockets or named pipes.
    7 KB (1,074 words) - 01:52, 3 May 2007
  • Expect (command)
    ...n platforms. For example, an Expect script that was written to use several Unix-based tools, might not be suitable if migrated to a Windows platform. If po
    7 KB (1,064 words) - 03:05, 13 April 2008
  • Units (command)
    units has been a standard part of Unix since the early Bell Laboratories versions.
    4 KB (615 words) - 22:12, 16 April 2007
  • Linux directory structure
    ...le|'''bin'''aries]] for all users (e.g., [[cat (Unix)|cat]], [[ls]], [[cp (Unix)|cp]])
    7 KB (974 words) - 20:12, 19 April 2022
  • Perl
    *'''''Minimal Perl: For UNIX and Linux People''''' by Tim Maher. ISBN 1-9323-9450-8.
    5 KB (746 words) - 04:15, 31 March 2008
  • Dd (command)
    see: [[wikipedia:dd (Unix)]] for more details. *[[wikipedia:dd (Unix)]]
    10 KB (1,656 words) - 01:46, 7 May 2018
  • Awk/scripts
    *Print lines whose length is less than 10 or greater than 20: ===Unix sockets===
    18 KB (2,772 words) - 22:57, 26 October 2021
  • Glob()
    '''glob()''' is a Unix library function that expands file names using a pattern matching notation
    4 KB (646 words) - 01:43, 16 June 2012
  • Pax
    ...IX File System Archiver. It supports the two most common forms of standard Unix archive (backup) files: [[cpio]] and [[tar]]. ...e files in the destination directory <code>/backup</code> which are older (less recent inode change or file modification times) than files with the same na
    1 KB (251 words) - 04:20, 6 July 2012
  • Samba
    Domain=[BUTLER] OS=[Unix] Server=[Samba 3.5.10-125.el6] Domain=[CIFSERVER] OS=[Unix] Server=[Samba 3.5.10-125.el6]
    5 KB (785 words) - 17:57, 8 May 2014
  • Crontab
    ...terhope.com/unix/ucrontab.htm Computer Hope] Information about the Linux / UNIX crontab command ...399/utilities/crontab.html Opengroup's crontab specification] - official [[UNIX 03]] documentation
    8 KB (1,304 words) - 08:49, 18 September 2021
  • Fstab
    ;conv={b[inary], t[ext], a[uto]} : Performs DOS<->UNIX text file conversions automatically. See mount(8). ...[[User identifier (Unix)|uid]], and group identifier, [[Group identifier (Unix)|gid]], for all files on the filesystem.
    6 KB (838 words) - 01:45, 3 April 2007
  • Common Unix Printing System
    ...mmon Unix Printing System''' ('''CUPS''') is a modular printing system for Unix-like computer operating systems that allows a computer to act as a powerful *[[wikipedia:Common Unix Printing System]]
    6 KB (795 words) - 22:59, 23 January 2008
  • CUPS
    #REDIRECT [[Common Unix Printing System]]
    41 bytes (5 words) - 01:27, 4 April 2007
  • List of GNU packages
    ...eveloped for or maintained by the Free Software Foundation for GNU, a free Unix-compatible operating system. Many of these software packages are today incl | GNU's UNIX compatible shell
    8 KB (1,101 words) - 05:31, 4 April 2007
  • SoX
    Sample scripts included with SoX. Since SoX is developed mainly under Unix, these scripts are usually <code>/bin/sh</code> scripts.
    4 KB (624 words) - 11:10, 28 October 2014
  • Diffutils
    ;[[:wikipedia:cmp (Unix)|cmp]] : shows the offset and line numbers where two files differ, or cmp c
    1 KB (218 words) - 17:47, 9 July 2012
  • Ccp4 directory structure
    | | `-- unix
    2 KB (275 words) - 02:06, 4 May 2007
  • Perl/Scripts
    less source/all.16s.fsa ...://www.amazon.com/o/ASIN/1932394508/sialorg-20/ref=nosim Minimal Perl: For UNIX and Linux People]
    14 KB (2,259 words) - 06:45, 24 September 2007
  • Gp
    ...e programs are written as a sort of 'biological' extension to the standard Unix tools ([[sed]], [[awk]], [[grep]], and the whole myriad of little, useful t
    7 KB (1,108 words) - 02:04, 13 July 2012
  • Autoconf
    ...atically configure software source code packages to adapt to many kinds of UNIX-like systems. The configuration scripts produced by Autoconf are independen
    479 bytes (68 words) - 00:31, 25 August 2007
  • Ack
    /~$/ - Unix backup files
    8 KB (1,112 words) - 00:03, 16 December 2012
  • Tput
    ...article will explore the '''tput''' command in [[Linux]]. It is a standard Unix operating system command, which is used to set terminal features. *Tansley DSW (2000). "Creating screen output". ''Linux and UNIX shell programming''. Safari Tech Books Online. Addison-Wesley. ISBN 978-0-2
    2 KB (242 words) - 21:34, 30 May 2012
  • Xxd
    *[[wikipedia:od (Unix)|od]]
    4 KB (563 words) - 02:39, 31 May 2012
  • Zsh
    The '''Z shell''' ('''zsh''') is a Unix shell that can be used as an interactive login shell and as a powerful comm
    1 KB (236 words) - 20:35, 11 July 2012
  • BLAST+
    *[http://www.ncbi.nlm.nih.gov/books/NBK52640/ Standalone BLAST Setup for Unix]
    11 KB (1,473 words) - 00:05, 10 July 2012
  • ELinks
    ...PEC, SHELL</code> : The shell used for File -> OS Shell on DOS/Windows and UNIX, respectively.
    11 KB (1,694 words) - 20:05, 24 July 2012
  • Socat
    ...annels may be files, pipes, devices (terminal or modem, etc.), or sockets (Unix, IPv4, IPv6, raw, UDP, TCP, SSL). It provides forking, logging and tracing, ...y (one-shot or daemon), as an external socksifier, as a shell interface to Unix sockets, as an IPv6 relay, as a [[netcat]] and rinetd replacement, to redir
    3 KB (439 words) - 05:15, 21 May 2014
  • Rackspace API
    ...local time). You can use the following [[Python]] code to translate from a Unix timestamp to your local time:
    38 KB (4,754 words) - 17:30, 19 September 2019
  • Cmus
    ...nfigurable colorscheme, mp3 and ogg streaming, it can be controlled with a UNIX socket, filters, album/artists sorting and a [[vi|vi-like]] configuration i
    963 bytes (134 words) - 22:38, 12 February 2015
  • Sysctl
    ...tl''' is an interface for examining and dynamically changing parameters in Unix-like operating systems. The [[Linux]] implementation primarily uses files c
    3 KB (441 words) - 02:14, 14 January 2016
  • Docker
    ...share that machine's operating system kernel; they start instantly and use less compute and RAM. Images are constructed from filesystem layers and share co ...ners, each running as isolated processes in user space. Containers take up less space than VMs (container images are typically tens of MBs in size), and st
    48 KB (6,756 words) - 21:40, 3 March 2023
  • Google Cloud Platform
    * Easier and less expensive than provisioning a server to watch for events |align="center"| Accessed less than once a month
    100 KB (12,852 words) - 00:23, 27 July 2021
  • Big Data
    * Structured like a regular Unix-like file system with data storage distributed across several machines in a |More lines of code || Less lines of code || Less lines of code
    53 KB (7,890 words) - 19:21, 23 March 2017
  • Kubernetes/the-hard-way
    --container-runtime-endpoint=unix:///var/run/containerd/containerd.sock \\ $ POD_ID=$(sudo crictl -r unix:///var/run/containerd/containerd.sock \
    71 KB (8,566 words) - 23:27, 9 August 2019
  • Kubernetes/GKE
    CronJobs use the required schedule field, which accepts time in the Unix standard crontab format. All CronJob times are in UTC:
    140 KB (19,601 words) - 06:57, 9 September 2021
  • Moreutils
    '''moreutils''' is a collection of Unix/[[Linux]] tools.
    1 KB (183 words) - 02:42, 16 March 2020
  • Here document
    ...ere documents are file literals or stream literals. These originate in the Unix shell, though similar facilities are available in some other languages. ===Unix shells===
    7 KB (1,241 words) - 00:46, 29 June 2020
  • LPIC
    * GNU and Unix Commands
    6 KB (733 words) - 22:25, 30 April 2021
  • Procfs
    The '''proc filesystem''' ('''procfs''') is a special filesystem in Unix-like operating systems that presents information about processes and other * [[Unix sockets]]
    10 KB (1,571 words) - 22:24, 20 January 2022
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