Difference between revisions of "MUSCLE"

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(See also)
 
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*[[Clustal]]
 
*[[Clustal]]
 
*[[T-Coffee]]
 
*[[T-Coffee]]
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*[http://www.biophys.kyoto-u.ac.jp/~katoh/programs/align/mafft/ MAFFT] — Multiple alignment program for amino acid or nucleotide sequences
  
 
==References==
 
==References==

Latest revision as of 07:51, 30 July 2007

MUSCLE (multiple sequence comparison by log-expectation) is a multiple sequence alignment program for protein and nucleotide sequences.[1][2]

Usage

see: MUSCLE User Guide for details.

Example

muscle -in seqs.fa -out seqs.afa

See also

References

  1. Edgar RC (2004). "MUSCLE: multiple sequence alignment with high accuracy and high throughput". Nucleic Acids Research, 32(5):1792-97.
  2. Edgar RC (2004). "MUSCLE: a multiple sequence alignment method with reduced time and space complexity". BMC Bioinformatics, 5(1):113.

External links