Bioinformatics topics

• wikipedia:Consensus sequence
• wikipedia:Conserved sequence
• wikipedia:Transcription factor
• wikipedia:G-quadruplex
• wikipedia:Nuclear receptor
• wikipedia:Shine-Dalgarno sequence
• wikipedia:Kozak consensus sequence
• wikipedia:Sequence motif
• wikipedia:Sequence analysis
• wikipedia:Sequence profiling tool
• wikipedia:CpG island / wikipedia:CpG site
• wikipedia:Gene prediction
• wikipedia:Comparative genomics
• wikipedia:Levenshtein distance
• wikipedia:Receiver operating characteristic
• wikipedia:Models of DNA evolution

Interactomics

• wikipedia:Interactomics
• wikipedia:Interactome
• wikipedia:Interaction network
• wikipedia:Protein-protein interaction prediction
• PSIMAP
• InterPare
• Interactome

Tools

• PhyloGibbs
• Chris Burge lab
• HMMER

Techniques

• Artificial neural network (ANN)
• Markov chain Monte Carlo (MCMC)
• Position-specific scoring matrix
• Recurrence plot (aka "close returns plot") — see: recurrence plot / dot plot / recurrence quantification analysis
  • Commandline Recurrence Plots
• Bioinformatics explained — by CLC bio
• Information Theory — a primer by Tom Schneider

Related

• wikipedia:Category:Signal processing
• wikipedia:List of numerical analysis software
• wikipedia:Correlation dimension
• wikipedia:Mutual information
• wikipedia:Chaos theory
• wikipedia:Information theory
• wikipedia:Probability theory