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• Bayesian Phylogenetic Analysis
  ===[[Markov chain Monte Carlo]] sampling=== see also: [[Markov chain]], [[Monte Carlo method]]
  28 KB (4,371 words) - 03:28, 14 April 2008
• Markov chain Monte Carlo
  ...chain Monte Carlo (MCMC)''' methods, sometimes called '''random walk Monte Carlo''' methods, are a class of algorithms for sampling from probability distrib ...oving rapid mixing include arguments based on conductance and the coupling method.
  6 KB (864 words) - 00:50, 30 December 2005
• Maximum a posteriori
  ...y on the basis of empirical data. It is closely related to Ronald Fisher's method of [[maximum likelihood]] (ML), but employs an augmented optimization objec ...[conjugate gradient method]] or [[Newton's method in optimization|Newton's method]]. This usually requires first or second [[derivative]]s, which have to be
  2 KB (305 words) - 23:05, 29 December 2005
• Bootstrapping
  In [[statistics]] bootstrapping is a method for estimating the sampling distribution of an estimator by resampling with See also particle filter for the general theory of ''Sequential Monte Carlo'' methods, as well as details on some common implementations.
  5 KB (732 words) - 04:52, 13 September 2006
• Inferring Phylogenies
  <li>Distance Wagner method</li> <li>The disk-covering method</li>
  20 KB (3,034 words) - 10:55, 6 January 2006